Gene : Cagra.3997s0002 C. grandiflora v1.1
Defline:  (1 of 2) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  2
Name:  ? Cagra.3997s0002 Secondary Identifier:  ? PAC:28911673
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLYCINE-SYN2-PWY Capsella grandiflora pathologic  
Cgrandiflora GLYCLEAV-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3997s0002 0.5kb upstream 0.5kb upstream 5130 true Scaffold3997: 10808-15937 Capsella grandiflora
Cagra.3997s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3997: 10808-11307 Capsella grandiflora
Cagra.3997s0002 0.5kb downstream 0.5kb downstream 5130 true Scaffold3997: 11308-16437 Capsella grandiflora
Cagra.3997s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3997: 15938-16437 Capsella grandiflora
Cagra.3997s0002 1.0kb upstream 1.0kb upstream 5630 true Scaffold3997: 10308-15937 Capsella grandiflora
Cagra.3997s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3997: 10308-11307 Capsella grandiflora
Cagra.3997s0002 1.0kb downstream 1.0kb downstream 5630 true Scaffold3997: 11308-16937 Capsella grandiflora
Cagra.3997s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3997: 15938-16937 Capsella grandiflora
Cagra.3997s0002 2.0kb upstream 2.0kb upstream 6630 true Scaffold3997: 9308-15937 Capsella grandiflora
Cagra.3997s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3997: 9308-11307 Capsella grandiflora
Cagra.3997s0002 2.0kb downstream 2.0kb downstream 6630 true Scaffold3997: 11308-17937 Capsella grandiflora
Cagra.3997s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3997: 15938-17937 Capsella grandiflora
Cagra.3997s0002 5.0kb upstream 5.0kb upstream 9630 true Scaffold3997: 6308-15937 Capsella grandiflora
Cagra.3997s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3997: 6308-11307 Capsella grandiflora
Cagra.3997s0002 5.0kb downstream 5.0kb downstream 9630 true Scaffold3997: 11308-20937 Capsella grandiflora
Cagra.3997s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3997: 15938-20937 Capsella grandiflora
Cagra.3997s0002 10.0kb upstream 10.0kb upstream 14630 true Scaffold3997: 1308-15937 Capsella grandiflora
Cagra.3997s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3997: 1308-11307 Capsella grandiflora
Cagra.3997s0002 10.0kb downstream 10.0kb downstream 9970 true Scaffold3997: 11308-21277 Capsella grandiflora
Cagra.3997s0002 10.0kb downstream 10.0kb downstream 5340 false Scaffold3997: 15938-21277 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376997 5261 Brassicaceae View MSA
123801413 5264 Brassicales-Malvales View MSA
124346734 5266 SBM View MSA
124253029 5268 Malvidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain