Gene : Cagra.4003s0019 C. grandiflora v1.1
Defline:  (1 of 5) PF07279 - Protein of unknown function (DUF1442) (DUF1442) Genomic Order:  19
Name:  ? Cagra.4003s0019 Secondary Identifier:  ? PAC:28894844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4003s0019 0.5kb upstream 0.5kb upstream 1605 true Scaffold4003: 84006-85610 Capsella grandiflora
Cagra.4003s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold4003: 84006-84505 Capsella grandiflora
Cagra.4003s0019 0.5kb downstream 0.5kb downstream 1605 true Scaffold4003: 84506-86110 Capsella grandiflora
Cagra.4003s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold4003: 85611-86110 Capsella grandiflora
Cagra.4003s0019 1.0kb upstream 1.0kb upstream 2105 true Scaffold4003: 83506-85610 Capsella grandiflora
Cagra.4003s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold4003: 83506-84505 Capsella grandiflora
Cagra.4003s0019 1.0kb downstream 1.0kb downstream 2105 true Scaffold4003: 84506-86610 Capsella grandiflora
Cagra.4003s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold4003: 85611-86610 Capsella grandiflora
Cagra.4003s0019 2.0kb upstream 2.0kb upstream 3105 true Scaffold4003: 82506-85610 Capsella grandiflora
Cagra.4003s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold4003: 82506-84505 Capsella grandiflora
Cagra.4003s0019 2.0kb downstream 2.0kb downstream 3105 true Scaffold4003: 84506-87610 Capsella grandiflora
Cagra.4003s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold4003: 85611-87610 Capsella grandiflora
Cagra.4003s0019 5.0kb upstream 5.0kb upstream 6105 true Scaffold4003: 79506-85610 Capsella grandiflora
Cagra.4003s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold4003: 79506-84505 Capsella grandiflora
Cagra.4003s0019 5.0kb downstream 5.0kb downstream 6105 true Scaffold4003: 84506-90610 Capsella grandiflora
Cagra.4003s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold4003: 85611-90610 Capsella grandiflora
Cagra.4003s0019 10.0kb upstream 10.0kb upstream 11105 true Scaffold4003: 74506-85610 Capsella grandiflora
Cagra.4003s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold4003: 74506-84505 Capsella grandiflora
Cagra.4003s0019 10.0kb downstream 10.0kb downstream 11105 true Scaffold4003: 84506-95610 Capsella grandiflora
Cagra.4003s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold4003: 85611-95610 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361698 5261 Brassicaceae View MSA
123839731 5264 Brassicales-Malvales View MSA
124342238 5266 SBM View MSA
124242186 5268 Malvidae View MSA
124072823 5270 Rosid View MSA
123746429 5271 Pentapetalae View MSA
122795029 5272 Eudicot View MSA
122048699 5273 Angiosperm View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain