Gene : Cagra.4003s0033 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33415:SF3 - EMB514 Genomic Order:  33
Name:  ? Cagra.4003s0033 Secondary Identifier:  ? PAC:28894838
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4003s0033 0.5kb upstream 0.5kb upstream 1667 true Scaffold4003: 137146-138812 Capsella grandiflora
Cagra.4003s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold4003: 138313-138812 Capsella grandiflora
Cagra.4003s0033 0.5kb downstream 0.5kb downstream 1667 true Scaffold4003: 136646-138312 Capsella grandiflora
Cagra.4003s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold4003: 136646-137145 Capsella grandiflora
Cagra.4003s0033 1.0kb upstream 1.0kb upstream 2167 true Scaffold4003: 137146-139312 Capsella grandiflora
Cagra.4003s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold4003: 138313-139312 Capsella grandiflora
Cagra.4003s0033 1.0kb downstream 1.0kb downstream 2167 true Scaffold4003: 136146-138312 Capsella grandiflora
Cagra.4003s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold4003: 136146-137145 Capsella grandiflora
Cagra.4003s0033 2.0kb upstream 2.0kb upstream 3167 true Scaffold4003: 137146-140312 Capsella grandiflora
Cagra.4003s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold4003: 138313-140312 Capsella grandiflora
Cagra.4003s0033 2.0kb downstream 2.0kb downstream 3167 true Scaffold4003: 135146-138312 Capsella grandiflora
Cagra.4003s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold4003: 135146-137145 Capsella grandiflora
Cagra.4003s0033 5.0kb upstream 5.0kb upstream 6167 true Scaffold4003: 137146-143312 Capsella grandiflora
Cagra.4003s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold4003: 138313-143312 Capsella grandiflora
Cagra.4003s0033 5.0kb downstream 5.0kb downstream 6167 true Scaffold4003: 132146-138312 Capsella grandiflora
Cagra.4003s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold4003: 132146-137145 Capsella grandiflora
Cagra.4003s0033 10.0kb upstream 10.0kb upstream 11167 true Scaffold4003: 137146-148312 Capsella grandiflora
Cagra.4003s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold4003: 138313-148312 Capsella grandiflora
Cagra.4003s0033 10.0kb downstream 10.0kb downstream 11167 true Scaffold4003: 127146-138312 Capsella grandiflora
Cagra.4003s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold4003: 127146-137145 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333682 5261 Brassicaceae Singleton cluster - no MSA
123774601 5264 Brassicales-Malvales Singleton cluster - no MSA
124273035 5266 SBM Singleton cluster - no MSA
124128742 5268 Malvidae Singleton cluster - no MSA
123857403 5270 Rosid Singleton cluster - no MSA
123742093 5271 Pentapetalae View MSA
122792599 5272 Eudicot View MSA
122051410 5273 Angiosperm View MSA
121348604 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain