Gene : Cagra.4003s0047 C. grandiflora v1.1
Defline:  (1 of 9) PF02985 - HEAT repeat (HEAT) Genomic Order:  47
Name:  ? Cagra.4003s0047 Secondary Identifier:  ? PAC:28894854
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4003s0047 0.5kb upstream 0.5kb upstream 3267 true Scaffold4003: 186310-189576 Capsella grandiflora
Cagra.4003s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold4003: 186310-186809 Capsella grandiflora
Cagra.4003s0047 0.5kb downstream 0.5kb downstream 3267 true Scaffold4003: 186810-190076 Capsella grandiflora
Cagra.4003s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold4003: 189577-190076 Capsella grandiflora
Cagra.4003s0047 1.0kb upstream 1.0kb upstream 3767 true Scaffold4003: 185810-189576 Capsella grandiflora
Cagra.4003s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold4003: 185810-186809 Capsella grandiflora
Cagra.4003s0047 1.0kb downstream 1.0kb downstream 3767 true Scaffold4003: 186810-190576 Capsella grandiflora
Cagra.4003s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold4003: 189577-190576 Capsella grandiflora
Cagra.4003s0047 2.0kb upstream 2.0kb upstream 4767 true Scaffold4003: 184810-189576 Capsella grandiflora
Cagra.4003s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold4003: 184810-186809 Capsella grandiflora
Cagra.4003s0047 2.0kb downstream 2.0kb downstream 4767 true Scaffold4003: 186810-191576 Capsella grandiflora
Cagra.4003s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold4003: 189577-191576 Capsella grandiflora
Cagra.4003s0047 5.0kb upstream 5.0kb upstream 7767 true Scaffold4003: 181810-189576 Capsella grandiflora
Cagra.4003s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold4003: 181810-186809 Capsella grandiflora
Cagra.4003s0047 5.0kb downstream 5.0kb downstream 7767 true Scaffold4003: 186810-194576 Capsella grandiflora
Cagra.4003s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold4003: 189577-194576 Capsella grandiflora
Cagra.4003s0047 10.0kb upstream 10.0kb upstream 12767 true Scaffold4003: 176810-189576 Capsella grandiflora
Cagra.4003s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold4003: 176810-186809 Capsella grandiflora
Cagra.4003s0047 10.0kb downstream 10.0kb downstream 12767 true Scaffold4003: 186810-199576 Capsella grandiflora
Cagra.4003s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold4003: 189577-199576 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
122374220 5261 Brassicaceae View MSA
123833216 5264 Brassicales-Malvales View MSA
124345883 5266 SBM View MSA
124242441 5268 Malvidae View MSA
124069706 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain