Gene : Cagra.4006s0024 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10513 - DEOXYNUCLEOSIDE KINASE Genomic Order:  24
Name:  ? Cagra.4006s0024 Secondary Identifier:  ? PAC:28913389
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7199 Capsella grandiflora pathologic  
Cgrandiflora PWY-7200 Capsella grandiflora pathologic  
Cgrandiflora PWY-7224 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4006s0024 0.5kb upstream 0.5kb upstream 2878 true Scaffold4006: 100809-103686 Capsella grandiflora
Cagra.4006s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold4006: 100809-101308 Capsella grandiflora
Cagra.4006s0024 0.5kb downstream 0.5kb downstream 2878 true Scaffold4006: 101309-104186 Capsella grandiflora
Cagra.4006s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold4006: 103687-104186 Capsella grandiflora
Cagra.4006s0024 1.0kb upstream 1.0kb upstream 3378 true Scaffold4006: 100309-103686 Capsella grandiflora
Cagra.4006s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold4006: 100309-101308 Capsella grandiflora
Cagra.4006s0024 1.0kb downstream 1.0kb downstream 3378 true Scaffold4006: 101309-104686 Capsella grandiflora
Cagra.4006s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold4006: 103687-104686 Capsella grandiflora
Cagra.4006s0024 2.0kb upstream 2.0kb upstream 4378 true Scaffold4006: 99309-103686 Capsella grandiflora
Cagra.4006s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold4006: 99309-101308 Capsella grandiflora
Cagra.4006s0024 2.0kb downstream 2.0kb downstream 4378 true Scaffold4006: 101309-105686 Capsella grandiflora
Cagra.4006s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold4006: 103687-105686 Capsella grandiflora
Cagra.4006s0024 5.0kb upstream 5.0kb upstream 7378 true Scaffold4006: 96309-103686 Capsella grandiflora
Cagra.4006s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold4006: 96309-101308 Capsella grandiflora
Cagra.4006s0024 5.0kb downstream 5.0kb downstream 7378 true Scaffold4006: 101309-108686 Capsella grandiflora
Cagra.4006s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold4006: 103687-108686 Capsella grandiflora
Cagra.4006s0024 10.0kb upstream 10.0kb upstream 12378 true Scaffold4006: 91309-103686 Capsella grandiflora
Cagra.4006s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold4006: 91309-101308 Capsella grandiflora
Cagra.4006s0024 10.0kb downstream 10.0kb downstream 12378 true Scaffold4006: 101309-113686 Capsella grandiflora
Cagra.4006s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold4006: 103687-113686 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376175 5261 Brassicaceae View MSA
123837850 5264 Brassicales-Malvales View MSA
124343896 5266 SBM View MSA
124244992 5268 Malvidae View MSA
124064096 5270 Rosid View MSA
123742042 5271 Pentapetalae View MSA
122786834 5272 Eudicot View MSA
122044312 5273 Angiosperm View MSA
121349442 5274 Embryophyte View MSA
123425271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain