Gene : Cagra.3924s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11353:SF63 - T-COMPLEX PROTEIN 1 SUBUNIT GAMMA Genomic Order:  16
Name:  ? Cagra.3924s0016 Secondary Identifier:  ? PAC:28900157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3924s0016 0.5kb upstream 0.5kb upstream 2851 true Scaffold3924: 60481-63331 Capsella grandiflora
Cagra.3924s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3924: 60481-60980 Capsella grandiflora
Cagra.3924s0016 0.5kb downstream 0.5kb downstream 2851 true Scaffold3924: 60981-63831 Capsella grandiflora
Cagra.3924s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3924: 63332-63831 Capsella grandiflora
Cagra.3924s0016 1.0kb upstream 1.0kb upstream 3351 true Scaffold3924: 59981-63331 Capsella grandiflora
Cagra.3924s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3924: 59981-60980 Capsella grandiflora
Cagra.3924s0016 1.0kb downstream 1.0kb downstream 3351 true Scaffold3924: 60981-64331 Capsella grandiflora
Cagra.3924s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3924: 63332-64331 Capsella grandiflora
Cagra.3924s0016 2.0kb upstream 2.0kb upstream 4351 true Scaffold3924: 58981-63331 Capsella grandiflora
Cagra.3924s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3924: 58981-60980 Capsella grandiflora
Cagra.3924s0016 2.0kb downstream 2.0kb downstream 4351 true Scaffold3924: 60981-65331 Capsella grandiflora
Cagra.3924s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3924: 63332-65331 Capsella grandiflora
Cagra.3924s0016 5.0kb upstream 5.0kb upstream 7351 true Scaffold3924: 55981-63331 Capsella grandiflora
Cagra.3924s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3924: 55981-60980 Capsella grandiflora
Cagra.3924s0016 5.0kb downstream 5.0kb downstream 7351 true Scaffold3924: 60981-68331 Capsella grandiflora
Cagra.3924s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3924: 63332-68331 Capsella grandiflora
Cagra.3924s0016 10.0kb upstream 10.0kb upstream 12351 true Scaffold3924: 50981-63331 Capsella grandiflora
Cagra.3924s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold3924: 50981-60980 Capsella grandiflora
Cagra.3924s0016 10.0kb downstream 10.0kb downstream 12351 true Scaffold3924: 60981-73331 Capsella grandiflora
Cagra.3924s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3924: 63332-73331 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333666 5261 Brassicaceae Singleton cluster - no MSA
123837602 5264 Brassicales-Malvales View MSA
124344637 5266 SBM View MSA
124239373 5268 Malvidae View MSA
124068834 5270 Rosid View MSA
123749348 5271 Pentapetalae View MSA
122787835 5272 Eudicot View MSA
122044598 5273 Angiosperm View MSA
121343839 5274 Embryophyte View MSA
123424692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain