Gene : Cagra.3957s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10705 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1 Genomic Order:  2
Name:  ? Cagra.3957s0002 Secondary Identifier:  ? PAC:28914788
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3957s0002 0.5kb upstream 0.5kb upstream 2359 true Scaffold3957: 9146-11504 Capsella grandiflora
Cagra.3957s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3957: 11005-11504 Capsella grandiflora
Cagra.3957s0002 0.5kb downstream 0.5kb downstream 2359 true Scaffold3957: 8646-11004 Capsella grandiflora
Cagra.3957s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3957: 8646-9145 Capsella grandiflora
Cagra.3957s0002 1.0kb upstream 1.0kb upstream 2859 true Scaffold3957: 9146-12004 Capsella grandiflora
Cagra.3957s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3957: 11005-12004 Capsella grandiflora
Cagra.3957s0002 1.0kb downstream 1.0kb downstream 2859 true Scaffold3957: 8146-11004 Capsella grandiflora
Cagra.3957s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3957: 8146-9145 Capsella grandiflora
Cagra.3957s0002 2.0kb upstream 2.0kb upstream 3859 true Scaffold3957: 9146-13004 Capsella grandiflora
Cagra.3957s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3957: 11005-13004 Capsella grandiflora
Cagra.3957s0002 2.0kb downstream 2.0kb downstream 3859 true Scaffold3957: 7146-11004 Capsella grandiflora
Cagra.3957s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3957: 7146-9145 Capsella grandiflora
Cagra.3957s0002 5.0kb upstream 5.0kb upstream 6859 true Scaffold3957: 9146-16004 Capsella grandiflora
Cagra.3957s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3957: 11005-16004 Capsella grandiflora
Cagra.3957s0002 5.0kb downstream 5.0kb downstream 6859 true Scaffold3957: 4146-11004 Capsella grandiflora
Cagra.3957s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3957: 4146-9145 Capsella grandiflora
Cagra.3957s0002 10.0kb upstream 10.0kb upstream 11859 true Scaffold3957: 9146-21004 Capsella grandiflora
Cagra.3957s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3957: 11005-21004 Capsella grandiflora
Cagra.3957s0002 10.0kb downstream 10.0kb downstream 11004 true Scaffold3957: 1-11004 Capsella grandiflora
Cagra.3957s0002 10.0kb downstream 10.0kb downstream 9145 false Scaffold3957: 1-9145 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361318 5261 Brassicaceae View MSA
123837119 5264 Brassicales-Malvales View MSA
124341057 5266 SBM View MSA
124239308 5268 Malvidae View MSA
124061217 5270 Rosid View MSA
123742864 5271 Pentapetalae View MSA
122792667 5272 Eudicot View MSA
122049085 5273 Angiosperm View MSA
121345892 5274 Embryophyte View MSA
123425631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain