Gene : Cagra.3957s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32263:SF4 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Genomic Order:  4
Name:  ? Cagra.3957s0004 Secondary Identifier:  ? PAC:28914783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3957s0004 0.5kb upstream 0.5kb upstream 4397 true Scaffold3957: 14055-18451 Capsella grandiflora
Cagra.3957s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3957: 14055-14554 Capsella grandiflora
Cagra.3957s0004 0.5kb downstream 0.5kb downstream 4397 true Scaffold3957: 14555-18951 Capsella grandiflora
Cagra.3957s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3957: 18452-18951 Capsella grandiflora
Cagra.3957s0004 1.0kb upstream 1.0kb upstream 4897 true Scaffold3957: 13555-18451 Capsella grandiflora
Cagra.3957s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3957: 13555-14554 Capsella grandiflora
Cagra.3957s0004 1.0kb downstream 1.0kb downstream 4897 true Scaffold3957: 14555-19451 Capsella grandiflora
Cagra.3957s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3957: 18452-19451 Capsella grandiflora
Cagra.3957s0004 2.0kb upstream 2.0kb upstream 5897 true Scaffold3957: 12555-18451 Capsella grandiflora
Cagra.3957s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3957: 12555-14554 Capsella grandiflora
Cagra.3957s0004 2.0kb downstream 2.0kb downstream 5897 true Scaffold3957: 14555-20451 Capsella grandiflora
Cagra.3957s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3957: 18452-20451 Capsella grandiflora
Cagra.3957s0004 5.0kb upstream 5.0kb upstream 8897 true Scaffold3957: 9555-18451 Capsella grandiflora
Cagra.3957s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3957: 9555-14554 Capsella grandiflora
Cagra.3957s0004 5.0kb downstream 5.0kb downstream 8897 true Scaffold3957: 14555-23451 Capsella grandiflora
Cagra.3957s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3957: 18452-23451 Capsella grandiflora
Cagra.3957s0004 10.0kb upstream 10.0kb upstream 13897 true Scaffold3957: 4555-18451 Capsella grandiflora
Cagra.3957s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3957: 4555-14554 Capsella grandiflora
Cagra.3957s0004 10.0kb downstream 10.0kb downstream 13897 true Scaffold3957: 14555-28451 Capsella grandiflora
Cagra.3957s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3957: 18452-28451 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363062 5261 Brassicaceae View MSA
123835120 5264 Brassicales-Malvales View MSA
124345157 5266 SBM View MSA
124250602 5268 Malvidae View MSA
124062640 5270 Rosid View MSA
123747359 5271 Pentapetalae View MSA
122788093 5272 Eudicot View MSA
122047704 5273 Angiosperm View MSA
121349325 5274 Embryophyte View MSA
123381278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain