Gene : Cagra.3807s0036 C. grandiflora v1.1
Defline:  (1 of 5) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  36
Name:  ? Cagra.3807s0036 Secondary Identifier:  ? PAC:28899145
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3807s0036 0.5kb upstream 0.5kb upstream 4346 true Scaffold3807: 135486-139831 Capsella grandiflora
Cagra.3807s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold3807: 139332-139831 Capsella grandiflora
Cagra.3807s0036 0.5kb downstream 0.5kb downstream 4346 true Scaffold3807: 134986-139331 Capsella grandiflora
Cagra.3807s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold3807: 134986-135485 Capsella grandiflora
Cagra.3807s0036 1.0kb upstream 1.0kb upstream 4846 true Scaffold3807: 135486-140331 Capsella grandiflora
Cagra.3807s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold3807: 139332-140331 Capsella grandiflora
Cagra.3807s0036 1.0kb downstream 1.0kb downstream 4846 true Scaffold3807: 134486-139331 Capsella grandiflora
Cagra.3807s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold3807: 134486-135485 Capsella grandiflora
Cagra.3807s0036 2.0kb upstream 2.0kb upstream 5846 true Scaffold3807: 135486-141331 Capsella grandiflora
Cagra.3807s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold3807: 139332-141331 Capsella grandiflora
Cagra.3807s0036 2.0kb downstream 2.0kb downstream 5846 true Scaffold3807: 133486-139331 Capsella grandiflora
Cagra.3807s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold3807: 133486-135485 Capsella grandiflora
Cagra.3807s0036 5.0kb upstream 5.0kb upstream 8846 true Scaffold3807: 135486-144331 Capsella grandiflora
Cagra.3807s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold3807: 139332-144331 Capsella grandiflora
Cagra.3807s0036 5.0kb downstream 5.0kb downstream 8846 true Scaffold3807: 130486-139331 Capsella grandiflora
Cagra.3807s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold3807: 130486-135485 Capsella grandiflora
Cagra.3807s0036 10.0kb upstream 10.0kb upstream 13846 true Scaffold3807: 135486-149331 Capsella grandiflora
Cagra.3807s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold3807: 139332-149331 Capsella grandiflora
Cagra.3807s0036 10.0kb downstream 10.0kb downstream 13846 true Scaffold3807: 125486-139331 Capsella grandiflora
Cagra.3807s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold3807: 125486-135485 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367050 5261 Brassicaceae View MSA
123799287 5264 Brassicales-Malvales View MSA
124350322 5266 SBM View MSA
124238605 5268 Malvidae View MSA
124069619 5270 Rosid View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain