Gene : Cagra.3823s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED Genomic Order:  18
Name:  ? Cagra.3823s0018 Secondary Identifier:  ? PAC:28913819
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3823s0018 0.5kb upstream 0.5kb upstream 1423 true Scaffold3823: 59942-61364 Capsella grandiflora
Cagra.3823s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold3823: 59942-60441 Capsella grandiflora
Cagra.3823s0018 0.5kb downstream 0.5kb downstream 1423 true Scaffold3823: 60442-61864 Capsella grandiflora
Cagra.3823s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold3823: 61365-61864 Capsella grandiflora
Cagra.3823s0018 1.0kb upstream 1.0kb upstream 1923 true Scaffold3823: 59442-61364 Capsella grandiflora
Cagra.3823s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold3823: 59442-60441 Capsella grandiflora
Cagra.3823s0018 1.0kb downstream 1.0kb downstream 1923 true Scaffold3823: 60442-62364 Capsella grandiflora
Cagra.3823s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold3823: 61365-62364 Capsella grandiflora
Cagra.3823s0018 2.0kb upstream 2.0kb upstream 2923 true Scaffold3823: 58442-61364 Capsella grandiflora
Cagra.3823s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold3823: 58442-60441 Capsella grandiflora
Cagra.3823s0018 2.0kb downstream 2.0kb downstream 2923 true Scaffold3823: 60442-63364 Capsella grandiflora
Cagra.3823s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold3823: 61365-63364 Capsella grandiflora
Cagra.3823s0018 5.0kb upstream 5.0kb upstream 5923 true Scaffold3823: 55442-61364 Capsella grandiflora
Cagra.3823s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold3823: 55442-60441 Capsella grandiflora
Cagra.3823s0018 5.0kb downstream 5.0kb downstream 5923 true Scaffold3823: 60442-66364 Capsella grandiflora
Cagra.3823s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold3823: 61365-66364 Capsella grandiflora
Cagra.3823s0018 10.0kb upstream 10.0kb upstream 10923 true Scaffold3823: 50442-61364 Capsella grandiflora
Cagra.3823s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold3823: 50442-60441 Capsella grandiflora
Cagra.3823s0018 10.0kb downstream 10.0kb downstream 10923 true Scaffold3823: 60442-71364 Capsella grandiflora
Cagra.3823s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold3823: 61365-71364 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376495 5261 Brassicaceae View MSA
123801268 5264 Brassicales-Malvales View MSA
124298591 5266 SBM View MSA
124253135 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain