Gene : Cagra.3834s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19321:SF5 - 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 6-RELATED Genomic Order:  1
Name:  ? Cagra.3834s0001 Secondary Identifier:  ? PAC:28903909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3834s0001 0.5kb upstream 0.5kb upstream 3751 true Scaffold3834: 1-3751 Capsella grandiflora
Cagra.3834s0001 0.5kb upstream 0.5kb upstream 3 false Scaffold3834: 1-3 Capsella grandiflora
Cagra.3834s0001 0.5kb downstream 0.5kb downstream 4248 true Scaffold3834: 4-4251 Capsella grandiflora
Cagra.3834s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3834: 3752-4251 Capsella grandiflora
Cagra.3834s0001 1.0kb upstream 1.0kb upstream 3751 true Scaffold3834: 1-3751 Capsella grandiflora
Cagra.3834s0001 1.0kb upstream 1.0kb upstream 3 false Scaffold3834: 1-3 Capsella grandiflora
Cagra.3834s0001 1.0kb downstream 1.0kb downstream 4748 true Scaffold3834: 4-4751 Capsella grandiflora
Cagra.3834s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3834: 3752-4751 Capsella grandiflora
Cagra.3834s0001 2.0kb upstream 2.0kb upstream 3751 true Scaffold3834: 1-3751 Capsella grandiflora
Cagra.3834s0001 2.0kb upstream 2.0kb upstream 3 false Scaffold3834: 1-3 Capsella grandiflora
Cagra.3834s0001 2.0kb downstream 2.0kb downstream 5748 true Scaffold3834: 4-5751 Capsella grandiflora
Cagra.3834s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3834: 3752-5751 Capsella grandiflora
Cagra.3834s0001 5.0kb upstream 5.0kb upstream 3751 true Scaffold3834: 1-3751 Capsella grandiflora
Cagra.3834s0001 5.0kb upstream 5.0kb upstream 3 false Scaffold3834: 1-3 Capsella grandiflora
Cagra.3834s0001 5.0kb downstream 5.0kb downstream 8748 true Scaffold3834: 4-8751 Capsella grandiflora
Cagra.3834s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3834: 3752-8751 Capsella grandiflora
Cagra.3834s0001 10.0kb upstream 10.0kb upstream 3751 true Scaffold3834: 1-3751 Capsella grandiflora
Cagra.3834s0001 10.0kb upstream 10.0kb upstream 3 false Scaffold3834: 1-3 Capsella grandiflora
Cagra.3834s0001 10.0kb downstream 10.0kb downstream 13748 true Scaffold3834: 4-13751 Capsella grandiflora
Cagra.3834s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3834: 3752-13751 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369474 5261 Brassicaceae View MSA
123836654 5264 Brassicales-Malvales View MSA
124344668 5266 SBM View MSA
124240214 5268 Malvidae View MSA
124060868 5270 Rosid View MSA
123736583 5271 Pentapetalae View MSA
122796828 5272 Eudicot View MSA
122045576 5273 Angiosperm View MSA
121350592 5274 Embryophyte View MSA
123428292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain