Gene : Cagra.3782s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11804:SF5 - MITOCHONDRIAL INTERMEDIATE PEPTIDASE Genomic Order:  3
Name:  ? Cagra.3782s0003 Secondary Identifier:  ? PAC:28902710
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3782s0003 0.5kb upstream 0.5kb upstream 4684 true Scaffold3782: 6225-10908 Capsella grandiflora
Cagra.3782s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3782: 10409-10908 Capsella grandiflora
Cagra.3782s0003 0.5kb downstream 0.5kb downstream 4684 true Scaffold3782: 5725-10408 Capsella grandiflora
Cagra.3782s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3782: 5725-6224 Capsella grandiflora
Cagra.3782s0003 1.0kb upstream 1.0kb upstream 5184 true Scaffold3782: 6225-11408 Capsella grandiflora
Cagra.3782s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3782: 10409-11408 Capsella grandiflora
Cagra.3782s0003 1.0kb downstream 1.0kb downstream 5184 true Scaffold3782: 5225-10408 Capsella grandiflora
Cagra.3782s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3782: 5225-6224 Capsella grandiflora
Cagra.3782s0003 2.0kb upstream 2.0kb upstream 6184 true Scaffold3782: 6225-12408 Capsella grandiflora
Cagra.3782s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3782: 10409-12408 Capsella grandiflora
Cagra.3782s0003 2.0kb downstream 2.0kb downstream 6184 true Scaffold3782: 4225-10408 Capsella grandiflora
Cagra.3782s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3782: 4225-6224 Capsella grandiflora
Cagra.3782s0003 5.0kb upstream 5.0kb upstream 9184 true Scaffold3782: 6225-15408 Capsella grandiflora
Cagra.3782s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3782: 10409-15408 Capsella grandiflora
Cagra.3782s0003 5.0kb downstream 5.0kb downstream 9184 true Scaffold3782: 1225-10408 Capsella grandiflora
Cagra.3782s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3782: 1225-6224 Capsella grandiflora
Cagra.3782s0003 10.0kb upstream 10.0kb upstream 14184 true Scaffold3782: 6225-20408 Capsella grandiflora
Cagra.3782s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3782: 10409-20408 Capsella grandiflora
Cagra.3782s0003 10.0kb downstream 10.0kb downstream 10408 true Scaffold3782: 1-10408 Capsella grandiflora
Cagra.3782s0003 10.0kb downstream 10.0kb downstream 6224 false Scaffold3782: 1-6224 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367085 5261 Brassicaceae View MSA
123841500 5264 Brassicales-Malvales View MSA
124342353 5266 SBM View MSA
124240300 5268 Malvidae View MSA
124071882 5270 Rosid View MSA
123740911 5271 Pentapetalae View MSA
122790063 5272 Eudicot View MSA
122047450 5273 Angiosperm View MSA
121347526 5274 Embryophyte View MSA
123424880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain