Gene : Cagra.3782s0005 C. grandiflora v1.1
Defline:  (1 of 1) KOG4054 - Uncharacterized conserved protein Genomic Order:  5
Name:  ? Cagra.3782s0005 Secondary Identifier:  ? PAC:28902690
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3782s0005 0.5kb upstream 0.5kb upstream 2219 true Scaffold3782: 14520-16738 Capsella grandiflora
Cagra.3782s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3782: 16239-16738 Capsella grandiflora
Cagra.3782s0005 0.5kb downstream 0.5kb downstream 2219 true Scaffold3782: 14020-16238 Capsella grandiflora
Cagra.3782s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3782: 14020-14519 Capsella grandiflora
Cagra.3782s0005 1.0kb upstream 1.0kb upstream 2719 true Scaffold3782: 14520-17238 Capsella grandiflora
Cagra.3782s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3782: 16239-17238 Capsella grandiflora
Cagra.3782s0005 1.0kb downstream 1.0kb downstream 2719 true Scaffold3782: 13520-16238 Capsella grandiflora
Cagra.3782s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3782: 13520-14519 Capsella grandiflora
Cagra.3782s0005 2.0kb upstream 2.0kb upstream 3719 true Scaffold3782: 14520-18238 Capsella grandiflora
Cagra.3782s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3782: 16239-18238 Capsella grandiflora
Cagra.3782s0005 2.0kb downstream 2.0kb downstream 3719 true Scaffold3782: 12520-16238 Capsella grandiflora
Cagra.3782s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3782: 12520-14519 Capsella grandiflora
Cagra.3782s0005 5.0kb upstream 5.0kb upstream 6719 true Scaffold3782: 14520-21238 Capsella grandiflora
Cagra.3782s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3782: 16239-21238 Capsella grandiflora
Cagra.3782s0005 5.0kb downstream 5.0kb downstream 6719 true Scaffold3782: 9520-16238 Capsella grandiflora
Cagra.3782s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3782: 9520-14519 Capsella grandiflora
Cagra.3782s0005 10.0kb upstream 10.0kb upstream 11719 true Scaffold3782: 14520-26238 Capsella grandiflora
Cagra.3782s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3782: 16239-26238 Capsella grandiflora
Cagra.3782s0005 10.0kb downstream 10.0kb downstream 11719 true Scaffold3782: 4520-16238 Capsella grandiflora
Cagra.3782s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3782: 4520-14519 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377665 5261 Brassicaceae View MSA
123835848 5264 Brassicales-Malvales View MSA
124345466 5266 SBM View MSA
124241147 5268 Malvidae View MSA
124063562 5270 Rosid View MSA
123743270 5271 Pentapetalae View MSA
122789019 5272 Eudicot View MSA
122045382 5273 Angiosperm View MSA
121344737 5274 Embryophyte View MSA
123427393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain