Gene : Cagra.3782s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  11
Name:  ? Cagra.3782s0011 Secondary Identifier:  ? PAC:28902694
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3782s0011 0.5kb upstream 0.5kb upstream 3978 true Scaffold3782: 35710-39687 Capsella grandiflora
Cagra.3782s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold3782: 39188-39687 Capsella grandiflora
Cagra.3782s0011 0.5kb downstream 0.5kb downstream 3978 true Scaffold3782: 35210-39187 Capsella grandiflora
Cagra.3782s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold3782: 35210-35709 Capsella grandiflora
Cagra.3782s0011 1.0kb upstream 1.0kb upstream 4478 true Scaffold3782: 35710-40187 Capsella grandiflora
Cagra.3782s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold3782: 39188-40187 Capsella grandiflora
Cagra.3782s0011 1.0kb downstream 1.0kb downstream 4478 true Scaffold3782: 34710-39187 Capsella grandiflora
Cagra.3782s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold3782: 34710-35709 Capsella grandiflora
Cagra.3782s0011 2.0kb upstream 2.0kb upstream 5478 true Scaffold3782: 35710-41187 Capsella grandiflora
Cagra.3782s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold3782: 39188-41187 Capsella grandiflora
Cagra.3782s0011 2.0kb downstream 2.0kb downstream 5478 true Scaffold3782: 33710-39187 Capsella grandiflora
Cagra.3782s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold3782: 33710-35709 Capsella grandiflora
Cagra.3782s0011 5.0kb upstream 5.0kb upstream 8478 true Scaffold3782: 35710-44187 Capsella grandiflora
Cagra.3782s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold3782: 39188-44187 Capsella grandiflora
Cagra.3782s0011 5.0kb downstream 5.0kb downstream 8478 true Scaffold3782: 30710-39187 Capsella grandiflora
Cagra.3782s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold3782: 30710-35709 Capsella grandiflora
Cagra.3782s0011 10.0kb upstream 10.0kb upstream 13478 true Scaffold3782: 35710-49187 Capsella grandiflora
Cagra.3782s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold3782: 39188-49187 Capsella grandiflora
Cagra.3782s0011 10.0kb downstream 10.0kb downstream 13478 true Scaffold3782: 25710-39187 Capsella grandiflora
Cagra.3782s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold3782: 25710-35709 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369387 5261 Brassicaceae View MSA
123834936 5264 Brassicales-Malvales View MSA
124342221 5266 SBM View MSA
124250650 5268 Malvidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain