Gene : Cagra.3807s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10635 - COATOMER SUBUNIT BETA Genomic Order:  21
Name:  ? Cagra.3807s0021 Secondary Identifier:  ? PAC:28899180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3807s0021 0.5kb upstream 0.5kb upstream 5147 true Scaffold3807: 75402-80548 Capsella grandiflora
Cagra.3807s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3807: 75402-75901 Capsella grandiflora
Cagra.3807s0021 0.5kb downstream 0.5kb downstream 5147 true Scaffold3807: 75902-81048 Capsella grandiflora
Cagra.3807s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3807: 80549-81048 Capsella grandiflora
Cagra.3807s0021 1.0kb upstream 1.0kb upstream 5647 true Scaffold3807: 74902-80548 Capsella grandiflora
Cagra.3807s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3807: 74902-75901 Capsella grandiflora
Cagra.3807s0021 1.0kb downstream 1.0kb downstream 5647 true Scaffold3807: 75902-81548 Capsella grandiflora
Cagra.3807s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold3807: 80549-81548 Capsella grandiflora
Cagra.3807s0021 2.0kb upstream 2.0kb upstream 6647 true Scaffold3807: 73902-80548 Capsella grandiflora
Cagra.3807s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3807: 73902-75901 Capsella grandiflora
Cagra.3807s0021 2.0kb downstream 2.0kb downstream 6647 true Scaffold3807: 75902-82548 Capsella grandiflora
Cagra.3807s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold3807: 80549-82548 Capsella grandiflora
Cagra.3807s0021 5.0kb upstream 5.0kb upstream 9647 true Scaffold3807: 70902-80548 Capsella grandiflora
Cagra.3807s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3807: 70902-75901 Capsella grandiflora
Cagra.3807s0021 5.0kb downstream 5.0kb downstream 9647 true Scaffold3807: 75902-85548 Capsella grandiflora
Cagra.3807s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold3807: 80549-85548 Capsella grandiflora
Cagra.3807s0021 10.0kb upstream 10.0kb upstream 14647 true Scaffold3807: 65902-80548 Capsella grandiflora
Cagra.3807s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3807: 65902-75901 Capsella grandiflora
Cagra.3807s0021 10.0kb downstream 10.0kb downstream 14647 true Scaffold3807: 75902-90548 Capsella grandiflora
Cagra.3807s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold3807: 80549-90548 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380202 5261 Brassicaceae View MSA
123837380 5264 Brassicales-Malvales View MSA
124337981 5266 SBM View MSA
124253813 5268 Malvidae View MSA
124065848 5270 Rosid View MSA
123753306 5271 Pentapetalae View MSA
122786430 5272 Eudicot View MSA
122042761 5273 Angiosperm View MSA
121349465 5274 Embryophyte View MSA
123426432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain