Gene : Cagra.3807s0029 C. grandiflora v1.1
Defline:  (1 of 5) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) Genomic Order:  29
Name:  ? Cagra.3807s0029 Secondary Identifier:  ? PAC:28899195
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3807s0029 0.5kb upstream 0.5kb upstream 3117 true Scaffold3807: 111097-114213 Capsella grandiflora
Cagra.3807s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold3807: 111097-111596 Capsella grandiflora
Cagra.3807s0029 0.5kb downstream 0.5kb downstream 3117 true Scaffold3807: 111597-114713 Capsella grandiflora
Cagra.3807s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold3807: 114214-114713 Capsella grandiflora
Cagra.3807s0029 1.0kb upstream 1.0kb upstream 3617 true Scaffold3807: 110597-114213 Capsella grandiflora
Cagra.3807s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold3807: 110597-111596 Capsella grandiflora
Cagra.3807s0029 1.0kb downstream 1.0kb downstream 3617 true Scaffold3807: 111597-115213 Capsella grandiflora
Cagra.3807s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold3807: 114214-115213 Capsella grandiflora
Cagra.3807s0029 2.0kb upstream 2.0kb upstream 4617 true Scaffold3807: 109597-114213 Capsella grandiflora
Cagra.3807s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold3807: 109597-111596 Capsella grandiflora
Cagra.3807s0029 2.0kb downstream 2.0kb downstream 4617 true Scaffold3807: 111597-116213 Capsella grandiflora
Cagra.3807s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold3807: 114214-116213 Capsella grandiflora
Cagra.3807s0029 5.0kb upstream 5.0kb upstream 7617 true Scaffold3807: 106597-114213 Capsella grandiflora
Cagra.3807s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold3807: 106597-111596 Capsella grandiflora
Cagra.3807s0029 5.0kb downstream 5.0kb downstream 7617 true Scaffold3807: 111597-119213 Capsella grandiflora
Cagra.3807s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold3807: 114214-119213 Capsella grandiflora
Cagra.3807s0029 10.0kb upstream 10.0kb upstream 12617 true Scaffold3807: 101597-114213 Capsella grandiflora
Cagra.3807s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold3807: 101597-111596 Capsella grandiflora
Cagra.3807s0029 10.0kb downstream 10.0kb downstream 12617 true Scaffold3807: 111597-124213 Capsella grandiflora
Cagra.3807s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold3807: 114214-124213 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367439 5261 Brassicaceae View MSA
123837145 5264 Brassicales-Malvales View MSA
124339653 5266 SBM View MSA
124250665 5268 Malvidae View MSA
124069927 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain