Gene : Cagra.4497s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR27001:SF6 - PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK10-RELATED Genomic Order:  17
Name:  ? Cagra.4497s0017 Secondary Identifier:  ? PAC:28911611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4497s0017 0.5kb upstream 0.5kb upstream 4551 true Scaffold4497: 65419-69969 Capsella grandiflora
Cagra.4497s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold4497: 65419-65918 Capsella grandiflora
Cagra.4497s0017 0.5kb downstream 0.5kb downstream 4551 true Scaffold4497: 65919-70469 Capsella grandiflora
Cagra.4497s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold4497: 69970-70469 Capsella grandiflora
Cagra.4497s0017 1.0kb upstream 1.0kb upstream 5051 true Scaffold4497: 64919-69969 Capsella grandiflora
Cagra.4497s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold4497: 64919-65918 Capsella grandiflora
Cagra.4497s0017 1.0kb downstream 1.0kb downstream 5051 true Scaffold4497: 65919-70969 Capsella grandiflora
Cagra.4497s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold4497: 69970-70969 Capsella grandiflora
Cagra.4497s0017 2.0kb upstream 2.0kb upstream 6051 true Scaffold4497: 63919-69969 Capsella grandiflora
Cagra.4497s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold4497: 63919-65918 Capsella grandiflora
Cagra.4497s0017 2.0kb downstream 2.0kb downstream 6051 true Scaffold4497: 65919-71969 Capsella grandiflora
Cagra.4497s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold4497: 69970-71969 Capsella grandiflora
Cagra.4497s0017 5.0kb upstream 5.0kb upstream 9051 true Scaffold4497: 60919-69969 Capsella grandiflora
Cagra.4497s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold4497: 60919-65918 Capsella grandiflora
Cagra.4497s0017 5.0kb downstream 5.0kb downstream 6856 true Scaffold4497: 65919-72774 Capsella grandiflora
Cagra.4497s0017 5.0kb downstream 5.0kb downstream 2805 false Scaffold4497: 69970-72774 Capsella grandiflora
Cagra.4497s0017 10.0kb upstream 10.0kb upstream 14051 true Scaffold4497: 55919-69969 Capsella grandiflora
Cagra.4497s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold4497: 55919-65918 Capsella grandiflora
Cagra.4497s0017 10.0kb downstream 10.0kb downstream 6856 true Scaffold4497: 65919-72774 Capsella grandiflora
Cagra.4497s0017 10.0kb downstream 10.0kb downstream 2805 false Scaffold4497: 69970-72774 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373113 5261 Brassicaceae View MSA
123830846 5264 Brassicales-Malvales View MSA
124342315 5266 SBM View MSA
124243010 5268 Malvidae View MSA
124063258 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain