Gene : Cagra.4553s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10015:SF168 - HEAT STRESS TRANSCRIPTION FACTOR B-2A Genomic Order:  8
Name:  ? Cagra.4553s0008 Secondary Identifier:  ? PAC:28907097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4553s0008 0.5kb upstream 0.5kb upstream 1799 true Scaffold4553: 23042-24840 Capsella grandiflora
Cagra.4553s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold4553: 24341-24840 Capsella grandiflora
Cagra.4553s0008 0.5kb downstream 0.5kb downstream 1799 true Scaffold4553: 22542-24340 Capsella grandiflora
Cagra.4553s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold4553: 22542-23041 Capsella grandiflora
Cagra.4553s0008 1.0kb upstream 1.0kb upstream 2299 true Scaffold4553: 23042-25340 Capsella grandiflora
Cagra.4553s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold4553: 24341-25340 Capsella grandiflora
Cagra.4553s0008 1.0kb downstream 1.0kb downstream 2299 true Scaffold4553: 22042-24340 Capsella grandiflora
Cagra.4553s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold4553: 22042-23041 Capsella grandiflora
Cagra.4553s0008 2.0kb upstream 2.0kb upstream 3299 true Scaffold4553: 23042-26340 Capsella grandiflora
Cagra.4553s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold4553: 24341-26340 Capsella grandiflora
Cagra.4553s0008 2.0kb downstream 2.0kb downstream 3299 true Scaffold4553: 21042-24340 Capsella grandiflora
Cagra.4553s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold4553: 21042-23041 Capsella grandiflora
Cagra.4553s0008 5.0kb upstream 5.0kb upstream 6299 true Scaffold4553: 23042-29340 Capsella grandiflora
Cagra.4553s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold4553: 24341-29340 Capsella grandiflora
Cagra.4553s0008 5.0kb downstream 5.0kb downstream 6299 true Scaffold4553: 18042-24340 Capsella grandiflora
Cagra.4553s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold4553: 18042-23041 Capsella grandiflora
Cagra.4553s0008 10.0kb upstream 10.0kb upstream 11299 true Scaffold4553: 23042-34340 Capsella grandiflora
Cagra.4553s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold4553: 24341-34340 Capsella grandiflora
Cagra.4553s0008 10.0kb downstream 10.0kb downstream 11299 true Scaffold4553: 13042-24340 Capsella grandiflora
Cagra.4553s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold4553: 13042-23041 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369787 5261 Brassicaceae View MSA
123828746 5264 Brassicales-Malvales View MSA
124348408 5266 SBM View MSA
124238231 5268 Malvidae View MSA
124071788 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain