Gene : Cagra.4395s0154 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11207//PTHR11207:SF1 - RIBONUCLEASE III Genomic Order:  154
Name:  ? Cagra.4395s0154 Secondary Identifier:  ? PAC:28898463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0154 0.5kb upstream 0.5kb upstream 2830 true Scaffold4395: 590586-593415 Capsella grandiflora
Cagra.4395s0154 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 592916-593415 Capsella grandiflora
Cagra.4395s0154 0.5kb downstream 0.5kb downstream 2830 true Scaffold4395: 590086-592915 Capsella grandiflora
Cagra.4395s0154 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 590086-590585 Capsella grandiflora
Cagra.4395s0154 1.0kb upstream 1.0kb upstream 3330 true Scaffold4395: 590586-593915 Capsella grandiflora
Cagra.4395s0154 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 592916-593915 Capsella grandiflora
Cagra.4395s0154 1.0kb downstream 1.0kb downstream 3330 true Scaffold4395: 589586-592915 Capsella grandiflora
Cagra.4395s0154 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 589586-590585 Capsella grandiflora
Cagra.4395s0154 2.0kb upstream 2.0kb upstream 4330 true Scaffold4395: 590586-594915 Capsella grandiflora
Cagra.4395s0154 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 592916-594915 Capsella grandiflora
Cagra.4395s0154 2.0kb downstream 2.0kb downstream 4330 true Scaffold4395: 588586-592915 Capsella grandiflora
Cagra.4395s0154 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 588586-590585 Capsella grandiflora
Cagra.4395s0154 5.0kb upstream 5.0kb upstream 7330 true Scaffold4395: 590586-597915 Capsella grandiflora
Cagra.4395s0154 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 592916-597915 Capsella grandiflora
Cagra.4395s0154 5.0kb downstream 5.0kb downstream 7330 true Scaffold4395: 585586-592915 Capsella grandiflora
Cagra.4395s0154 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 585586-590585 Capsella grandiflora
Cagra.4395s0154 10.0kb upstream 10.0kb upstream 12330 true Scaffold4395: 590586-602915 Capsella grandiflora
Cagra.4395s0154 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 592916-602915 Capsella grandiflora
Cagra.4395s0154 10.0kb downstream 10.0kb downstream 12330 true Scaffold4395: 580586-592915 Capsella grandiflora
Cagra.4395s0154 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 580586-590585 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380189 5261 Brassicaceae View MSA
123802590 5264 Brassicales-Malvales View MSA
124350613 5266 SBM View MSA
124252447 5268 Malvidae View MSA
124069666 5270 Rosid View MSA
123748285 5271 Pentapetalae View MSA
122797580 5272 Eudicot View MSA
122051528 5273 Angiosperm View MSA
121350362 5274 Embryophyte View MSA
123381695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain