Gene : Cagra.4395s0186 C. grandiflora v1.1
Defline:  (1 of 1) PF03209 - PUCC protein (PUCC) Genomic Order:  186
Name:  ? Cagra.4395s0186 Secondary Identifier:  ? PAC:28898271
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0186 0.5kb upstream 0.5kb upstream 4142 true Scaffold4395: 703076-707217 Capsella grandiflora
Cagra.4395s0186 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 703076-703575 Capsella grandiflora
Cagra.4395s0186 0.5kb downstream 0.5kb downstream 4142 true Scaffold4395: 703576-707717 Capsella grandiflora
Cagra.4395s0186 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 707218-707717 Capsella grandiflora
Cagra.4395s0186 1.0kb upstream 1.0kb upstream 4642 true Scaffold4395: 702576-707217 Capsella grandiflora
Cagra.4395s0186 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 702576-703575 Capsella grandiflora
Cagra.4395s0186 1.0kb downstream 1.0kb downstream 4642 true Scaffold4395: 703576-708217 Capsella grandiflora
Cagra.4395s0186 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 707218-708217 Capsella grandiflora
Cagra.4395s0186 2.0kb upstream 2.0kb upstream 5642 true Scaffold4395: 701576-707217 Capsella grandiflora
Cagra.4395s0186 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 701576-703575 Capsella grandiflora
Cagra.4395s0186 2.0kb downstream 2.0kb downstream 5642 true Scaffold4395: 703576-709217 Capsella grandiflora
Cagra.4395s0186 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 707218-709217 Capsella grandiflora
Cagra.4395s0186 5.0kb upstream 5.0kb upstream 8642 true Scaffold4395: 698576-707217 Capsella grandiflora
Cagra.4395s0186 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 698576-703575 Capsella grandiflora
Cagra.4395s0186 5.0kb downstream 5.0kb downstream 8642 true Scaffold4395: 703576-712217 Capsella grandiflora
Cagra.4395s0186 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 707218-712217 Capsella grandiflora
Cagra.4395s0186 10.0kb upstream 10.0kb upstream 13642 true Scaffold4395: 693576-707217 Capsella grandiflora
Cagra.4395s0186 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 693576-703575 Capsella grandiflora
Cagra.4395s0186 10.0kb downstream 10.0kb downstream 13642 true Scaffold4395: 703576-717217 Capsella grandiflora
Cagra.4395s0186 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 707218-717217 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369201 5261 Brassicaceae View MSA
123840415 5264 Brassicales-Malvales View MSA
124350977 5266 SBM View MSA
124242201 5268 Malvidae View MSA
124064534 5270 Rosid View MSA
123741028 5271 Pentapetalae View MSA
122787102 5272 Eudicot View MSA
122044393 5273 Angiosperm View MSA
121349366 5274 Embryophyte View MSA
123381287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain