Gene : Cagra.4395s0039 C. grandiflora v1.1
Defline:  (1 of 1) 4.4.1.16 - Selenocysteine lyase / Selenocysteine reductase Genomic Order:  39
Name:  ? Cagra.4395s0039 Secondary Identifier:  ? PAC:28898257
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-1021 Capsella grandiflora pathologic  
Cgrandiflora PWY-6823 Capsella grandiflora pathologic  
Cgrandiflora PWY-7250 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0039 0.5kb upstream 0.5kb upstream 3553 true Scaffold4395: 156092-159644 Capsella grandiflora
Cagra.4395s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 159145-159644 Capsella grandiflora
Cagra.4395s0039 0.5kb downstream 0.5kb downstream 3553 true Scaffold4395: 155592-159144 Capsella grandiflora
Cagra.4395s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 155592-156091 Capsella grandiflora
Cagra.4395s0039 1.0kb upstream 1.0kb upstream 4053 true Scaffold4395: 156092-160144 Capsella grandiflora
Cagra.4395s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 159145-160144 Capsella grandiflora
Cagra.4395s0039 1.0kb downstream 1.0kb downstream 4053 true Scaffold4395: 155092-159144 Capsella grandiflora
Cagra.4395s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 155092-156091 Capsella grandiflora
Cagra.4395s0039 2.0kb upstream 2.0kb upstream 5053 true Scaffold4395: 156092-161144 Capsella grandiflora
Cagra.4395s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 159145-161144 Capsella grandiflora
Cagra.4395s0039 2.0kb downstream 2.0kb downstream 5053 true Scaffold4395: 154092-159144 Capsella grandiflora
Cagra.4395s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 154092-156091 Capsella grandiflora
Cagra.4395s0039 5.0kb upstream 5.0kb upstream 8053 true Scaffold4395: 156092-164144 Capsella grandiflora
Cagra.4395s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 159145-164144 Capsella grandiflora
Cagra.4395s0039 5.0kb downstream 5.0kb downstream 8053 true Scaffold4395: 151092-159144 Capsella grandiflora
Cagra.4395s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 151092-156091 Capsella grandiflora
Cagra.4395s0039 10.0kb upstream 10.0kb upstream 13053 true Scaffold4395: 156092-169144 Capsella grandiflora
Cagra.4395s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 159145-169144 Capsella grandiflora
Cagra.4395s0039 10.0kb downstream 10.0kb downstream 13053 true Scaffold4395: 146092-159144 Capsella grandiflora
Cagra.4395s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 146092-156091 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372199 5261 Brassicaceae View MSA
123832892 5264 Brassicales-Malvales View MSA
124346335 5266 SBM View MSA
124238187 5268 Malvidae View MSA
124062122 5270 Rosid View MSA
123738873 5271 Pentapetalae View MSA
122791237 5272 Eudicot View MSA
122045699 5273 Angiosperm View MSA
121346585 5274 Embryophyte View MSA
123424860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain