Gene : Cagra.4395s0047 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10438:SF245 - THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED Genomic Order:  47
Name:  ? Cagra.4395s0047 Secondary Identifier:  ? PAC:28898272
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0047 0.5kb upstream 0.5kb upstream 2354 true Scaffold4395: 183751-186104 Capsella grandiflora
Cagra.4395s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 183751-184250 Capsella grandiflora
Cagra.4395s0047 0.5kb downstream 0.5kb downstream 2354 true Scaffold4395: 184251-186604 Capsella grandiflora
Cagra.4395s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 186105-186604 Capsella grandiflora
Cagra.4395s0047 1.0kb upstream 1.0kb upstream 2854 true Scaffold4395: 183251-186104 Capsella grandiflora
Cagra.4395s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 183251-184250 Capsella grandiflora
Cagra.4395s0047 1.0kb downstream 1.0kb downstream 2854 true Scaffold4395: 184251-187104 Capsella grandiflora
Cagra.4395s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 186105-187104 Capsella grandiflora
Cagra.4395s0047 2.0kb upstream 2.0kb upstream 3854 true Scaffold4395: 182251-186104 Capsella grandiflora
Cagra.4395s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 182251-184250 Capsella grandiflora
Cagra.4395s0047 2.0kb downstream 2.0kb downstream 3854 true Scaffold4395: 184251-188104 Capsella grandiflora
Cagra.4395s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 186105-188104 Capsella grandiflora
Cagra.4395s0047 5.0kb upstream 5.0kb upstream 6854 true Scaffold4395: 179251-186104 Capsella grandiflora
Cagra.4395s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 179251-184250 Capsella grandiflora
Cagra.4395s0047 5.0kb downstream 5.0kb downstream 6854 true Scaffold4395: 184251-191104 Capsella grandiflora
Cagra.4395s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 186105-191104 Capsella grandiflora
Cagra.4395s0047 10.0kb upstream 10.0kb upstream 11854 true Scaffold4395: 174251-186104 Capsella grandiflora
Cagra.4395s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 174251-184250 Capsella grandiflora
Cagra.4395s0047 10.0kb downstream 10.0kb downstream 11854 true Scaffold4395: 184251-196104 Capsella grandiflora
Cagra.4395s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 186105-196104 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362353 5261 Brassicaceae View MSA
123837507 5264 Brassicales-Malvales View MSA
124344892 5266 SBM View MSA
124241000 5268 Malvidae View MSA
124067086 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain