Gene : Cagra.4399s0012 C. grandiflora v1.1
Defline:  (1 of 5) PF09353 - Domain of unknown function (DUF1995) (DUF1995) Genomic Order:  12
Name:  ? Cagra.4399s0012 Secondary Identifier:  ? PAC:28901976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4399s0012 0.5kb upstream 0.5kb upstream 2534 true Scaffold4399: 29186-31719 Capsella grandiflora
Cagra.4399s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold4399: 29186-29685 Capsella grandiflora
Cagra.4399s0012 0.5kb downstream 0.5kb downstream 2534 true Scaffold4399: 29686-32219 Capsella grandiflora
Cagra.4399s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold4399: 31720-32219 Capsella grandiflora
Cagra.4399s0012 1.0kb upstream 1.0kb upstream 3034 true Scaffold4399: 28686-31719 Capsella grandiflora
Cagra.4399s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold4399: 28686-29685 Capsella grandiflora
Cagra.4399s0012 1.0kb downstream 1.0kb downstream 3034 true Scaffold4399: 29686-32719 Capsella grandiflora
Cagra.4399s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold4399: 31720-32719 Capsella grandiflora
Cagra.4399s0012 2.0kb upstream 2.0kb upstream 4034 true Scaffold4399: 27686-31719 Capsella grandiflora
Cagra.4399s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold4399: 27686-29685 Capsella grandiflora
Cagra.4399s0012 2.0kb downstream 2.0kb downstream 4034 true Scaffold4399: 29686-33719 Capsella grandiflora
Cagra.4399s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold4399: 31720-33719 Capsella grandiflora
Cagra.4399s0012 5.0kb upstream 5.0kb upstream 7034 true Scaffold4399: 24686-31719 Capsella grandiflora
Cagra.4399s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold4399: 24686-29685 Capsella grandiflora
Cagra.4399s0012 5.0kb downstream 5.0kb downstream 7034 true Scaffold4399: 29686-36719 Capsella grandiflora
Cagra.4399s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold4399: 31720-36719 Capsella grandiflora
Cagra.4399s0012 10.0kb upstream 10.0kb upstream 12034 true Scaffold4399: 19686-31719 Capsella grandiflora
Cagra.4399s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold4399: 19686-29685 Capsella grandiflora
Cagra.4399s0012 10.0kb downstream 10.0kb downstream 12034 true Scaffold4399: 29686-41719 Capsella grandiflora
Cagra.4399s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold4399: 31720-41719 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364596 5261 Brassicaceae View MSA
123830630 5264 Brassicales-Malvales View MSA
124343230 5266 SBM View MSA
124237452 5268 Malvidae View MSA
124064170 5270 Rosid View MSA
123737767 5271 Pentapetalae View MSA
122791046 5272 Eudicot View MSA
122043787 5273 Angiosperm View MSA
121346197 5274 Embryophyte View MSA
123425008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain