Gene : Cagra.4354s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23293:SF9 - FAD SYNTHASE Genomic Order:  4
Name:  ? Cagra.4354s0004 Secondary Identifier:  ? PAC:28914643
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora RIBOSYN2-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4354s0004 0.5kb upstream 0.5kb upstream 5290 true Scaffold4354: 13990-19279 Capsella grandiflora
Cagra.4354s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4354: 18780-19279 Capsella grandiflora
Cagra.4354s0004 0.5kb downstream 0.5kb downstream 5290 true Scaffold4354: 13490-18779 Capsella grandiflora
Cagra.4354s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4354: 13490-13989 Capsella grandiflora
Cagra.4354s0004 1.0kb upstream 1.0kb upstream 5790 true Scaffold4354: 13990-19779 Capsella grandiflora
Cagra.4354s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4354: 18780-19779 Capsella grandiflora
Cagra.4354s0004 1.0kb downstream 1.0kb downstream 5790 true Scaffold4354: 12990-18779 Capsella grandiflora
Cagra.4354s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4354: 12990-13989 Capsella grandiflora
Cagra.4354s0004 2.0kb upstream 2.0kb upstream 6790 true Scaffold4354: 13990-20779 Capsella grandiflora
Cagra.4354s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4354: 18780-20779 Capsella grandiflora
Cagra.4354s0004 2.0kb downstream 2.0kb downstream 6790 true Scaffold4354: 11990-18779 Capsella grandiflora
Cagra.4354s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4354: 11990-13989 Capsella grandiflora
Cagra.4354s0004 5.0kb upstream 5.0kb upstream 9790 true Scaffold4354: 13990-23779 Capsella grandiflora
Cagra.4354s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4354: 18780-23779 Capsella grandiflora
Cagra.4354s0004 5.0kb downstream 5.0kb downstream 9790 true Scaffold4354: 8990-18779 Capsella grandiflora
Cagra.4354s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4354: 8990-13989 Capsella grandiflora
Cagra.4354s0004 10.0kb upstream 10.0kb upstream 14790 true Scaffold4354: 13990-28779 Capsella grandiflora
Cagra.4354s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4354: 18780-28779 Capsella grandiflora
Cagra.4354s0004 10.0kb downstream 10.0kb downstream 14790 true Scaffold4354: 3990-18779 Capsella grandiflora
Cagra.4354s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4354: 3990-13989 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371896 5261 Brassicaceae View MSA
123834209 5264 Brassicales-Malvales View MSA
124344430 5266 SBM View MSA
124239927 5268 Malvidae View MSA
124066901 5270 Rosid View MSA
123737491 5271 Pentapetalae View MSA
122769895 5272 Eudicot View MSA
122049798 5273 Angiosperm View MSA
121344639 5274 Embryophyte View MSA
123427825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain