Gene : Cagra.4354s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12548 - TRANSCRIPTION FACTOR DP Genomic Order:  2
Name:  ? Cagra.4354s0002 Secondary Identifier:  ? PAC:28914624
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4354s0002 0.5kb upstream 0.5kb upstream 3398 true Scaffold4354: 6673-10070 Capsella grandiflora
Cagra.4354s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4354: 6673-7172 Capsella grandiflora
Cagra.4354s0002 0.5kb downstream 0.5kb downstream 3398 true Scaffold4354: 7173-10570 Capsella grandiflora
Cagra.4354s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4354: 10071-10570 Capsella grandiflora
Cagra.4354s0002 1.0kb upstream 1.0kb upstream 3898 true Scaffold4354: 6173-10070 Capsella grandiflora
Cagra.4354s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4354: 6173-7172 Capsella grandiflora
Cagra.4354s0002 1.0kb downstream 1.0kb downstream 3898 true Scaffold4354: 7173-11070 Capsella grandiflora
Cagra.4354s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4354: 10071-11070 Capsella grandiflora
Cagra.4354s0002 2.0kb upstream 2.0kb upstream 4898 true Scaffold4354: 5173-10070 Capsella grandiflora
Cagra.4354s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4354: 5173-7172 Capsella grandiflora
Cagra.4354s0002 2.0kb downstream 2.0kb downstream 4898 true Scaffold4354: 7173-12070 Capsella grandiflora
Cagra.4354s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4354: 10071-12070 Capsella grandiflora
Cagra.4354s0002 5.0kb upstream 5.0kb upstream 7898 true Scaffold4354: 2173-10070 Capsella grandiflora
Cagra.4354s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4354: 2173-7172 Capsella grandiflora
Cagra.4354s0002 5.0kb downstream 5.0kb downstream 7898 true Scaffold4354: 7173-15070 Capsella grandiflora
Cagra.4354s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4354: 10071-15070 Capsella grandiflora
Cagra.4354s0002 10.0kb upstream 10.0kb upstream 10070 true Scaffold4354: 1-10070 Capsella grandiflora
Cagra.4354s0002 10.0kb upstream 10.0kb upstream 7172 false Scaffold4354: 1-7172 Capsella grandiflora
Cagra.4354s0002 10.0kb downstream 10.0kb downstream 12898 true Scaffold4354: 7173-20070 Capsella grandiflora
Cagra.4354s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4354: 10071-20070 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372141 5261 Brassicaceae View MSA
123839109 5264 Brassicales-Malvales View MSA
124336840 5266 SBM View MSA
124246539 5268 Malvidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain