Gene : Cagra.4327s0011 C. grandiflora v1.1
Defline:  (1 of 21) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  11
Name:  ? Cagra.4327s0011 Secondary Identifier:  ? PAC:28914741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4327s0011 0.5kb upstream 0.5kb upstream 4041 true Scaffold4327: 47469-51509 Capsella grandiflora
Cagra.4327s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold4327: 47469-47968 Capsella grandiflora
Cagra.4327s0011 0.5kb downstream 0.5kb downstream 4041 true Scaffold4327: 47969-52009 Capsella grandiflora
Cagra.4327s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold4327: 51510-52009 Capsella grandiflora
Cagra.4327s0011 1.0kb upstream 1.0kb upstream 4541 true Scaffold4327: 46969-51509 Capsella grandiflora
Cagra.4327s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold4327: 46969-47968 Capsella grandiflora
Cagra.4327s0011 1.0kb downstream 1.0kb downstream 4541 true Scaffold4327: 47969-52509 Capsella grandiflora
Cagra.4327s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold4327: 51510-52509 Capsella grandiflora
Cagra.4327s0011 2.0kb upstream 2.0kb upstream 5541 true Scaffold4327: 45969-51509 Capsella grandiflora
Cagra.4327s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold4327: 45969-47968 Capsella grandiflora
Cagra.4327s0011 2.0kb downstream 2.0kb downstream 5541 true Scaffold4327: 47969-53509 Capsella grandiflora
Cagra.4327s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold4327: 51510-53509 Capsella grandiflora
Cagra.4327s0011 5.0kb upstream 5.0kb upstream 8541 true Scaffold4327: 42969-51509 Capsella grandiflora
Cagra.4327s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold4327: 42969-47968 Capsella grandiflora
Cagra.4327s0011 5.0kb downstream 5.0kb downstream 8430 true Scaffold4327: 47969-56398 Capsella grandiflora
Cagra.4327s0011 5.0kb downstream 5.0kb downstream 4889 false Scaffold4327: 51510-56398 Capsella grandiflora
Cagra.4327s0011 10.0kb upstream 10.0kb upstream 13541 true Scaffold4327: 37969-51509 Capsella grandiflora
Cagra.4327s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold4327: 37969-47968 Capsella grandiflora
Cagra.4327s0011 10.0kb downstream 10.0kb downstream 8430 true Scaffold4327: 47969-56398 Capsella grandiflora
Cagra.4327s0011 10.0kb downstream 10.0kb downstream 4889 false Scaffold4327: 51510-56398 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364601 5261 Brassicaceae View MSA
123835513 5264 Brassicales-Malvales View MSA
124337531 5266 SBM View MSA
124244442 5268 Malvidae View MSA
124061696 5270 Rosid View MSA
123736594 5271 Pentapetalae View MSA
122785807 5272 Eudicot View MSA
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain