Gene : Cagra.4329s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C 26-RELATED Genomic Order:  4
Name:  ? Cagra.4329s0004 Secondary Identifier:  ? PAC:28902401
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4329s0004 0.5kb upstream 0.5kb upstream 2540 true Scaffold4329: 18362-20901 Capsella grandiflora
Cagra.4329s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4329: 18362-18861 Capsella grandiflora
Cagra.4329s0004 0.5kb downstream 0.5kb downstream 2540 true Scaffold4329: 18862-21401 Capsella grandiflora
Cagra.4329s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4329: 20902-21401 Capsella grandiflora
Cagra.4329s0004 1.0kb upstream 1.0kb upstream 3040 true Scaffold4329: 17862-20901 Capsella grandiflora
Cagra.4329s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4329: 17862-18861 Capsella grandiflora
Cagra.4329s0004 1.0kb downstream 1.0kb downstream 3040 true Scaffold4329: 18862-21901 Capsella grandiflora
Cagra.4329s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4329: 20902-21901 Capsella grandiflora
Cagra.4329s0004 2.0kb upstream 2.0kb upstream 4040 true Scaffold4329: 16862-20901 Capsella grandiflora
Cagra.4329s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4329: 16862-18861 Capsella grandiflora
Cagra.4329s0004 2.0kb downstream 2.0kb downstream 4040 true Scaffold4329: 18862-22901 Capsella grandiflora
Cagra.4329s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4329: 20902-22901 Capsella grandiflora
Cagra.4329s0004 5.0kb upstream 5.0kb upstream 7040 true Scaffold4329: 13862-20901 Capsella grandiflora
Cagra.4329s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4329: 13862-18861 Capsella grandiflora
Cagra.4329s0004 5.0kb downstream 5.0kb downstream 4328 true Scaffold4329: 18862-23189 Capsella grandiflora
Cagra.4329s0004 5.0kb downstream 5.0kb downstream 2288 false Scaffold4329: 20902-23189 Capsella grandiflora
Cagra.4329s0004 10.0kb upstream 10.0kb upstream 12040 true Scaffold4329: 8862-20901 Capsella grandiflora
Cagra.4329s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4329: 8862-18861 Capsella grandiflora
Cagra.4329s0004 10.0kb downstream 10.0kb downstream 4328 true Scaffold4329: 18862-23189 Capsella grandiflora
Cagra.4329s0004 10.0kb downstream 10.0kb downstream 2288 false Scaffold4329: 20902-23189 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361339 5261 Brassicaceae View MSA
123829273 5264 Brassicales-Malvales View MSA
124346579 5266 SBM View MSA
124237499 5268 Malvidae View MSA
124067424 5270 Rosid View MSA
123737907 5271 Pentapetalae View MSA
122786654 5272 Eudicot View MSA
122044601 5273 Angiosperm View MSA
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain