Gene : Cagra.4195s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11599:SF11 - PROTEASOME SUBUNIT ALPHA TYPE-6 Genomic Order:  7
Name:  ? Cagra.4195s0007 Secondary Identifier:  ? PAC:28914491
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4195s0007 0.5kb upstream 0.5kb upstream 3090 true Scaffold4195: 16350-19439 Capsella grandiflora
Cagra.4195s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold4195: 16350-16849 Capsella grandiflora
Cagra.4195s0007 0.5kb downstream 0.5kb downstream 3090 true Scaffold4195: 16850-19939 Capsella grandiflora
Cagra.4195s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold4195: 19440-19939 Capsella grandiflora
Cagra.4195s0007 1.0kb upstream 1.0kb upstream 3590 true Scaffold4195: 15850-19439 Capsella grandiflora
Cagra.4195s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold4195: 15850-16849 Capsella grandiflora
Cagra.4195s0007 1.0kb downstream 1.0kb downstream 3590 true Scaffold4195: 16850-20439 Capsella grandiflora
Cagra.4195s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold4195: 19440-20439 Capsella grandiflora
Cagra.4195s0007 2.0kb upstream 2.0kb upstream 4590 true Scaffold4195: 14850-19439 Capsella grandiflora
Cagra.4195s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold4195: 14850-16849 Capsella grandiflora
Cagra.4195s0007 2.0kb downstream 2.0kb downstream 4590 true Scaffold4195: 16850-21439 Capsella grandiflora
Cagra.4195s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold4195: 19440-21439 Capsella grandiflora
Cagra.4195s0007 5.0kb upstream 5.0kb upstream 7590 true Scaffold4195: 11850-19439 Capsella grandiflora
Cagra.4195s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold4195: 11850-16849 Capsella grandiflora
Cagra.4195s0007 5.0kb downstream 5.0kb downstream 7590 true Scaffold4195: 16850-24439 Capsella grandiflora
Cagra.4195s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold4195: 19440-24439 Capsella grandiflora
Cagra.4195s0007 10.0kb upstream 10.0kb upstream 12590 true Scaffold4195: 6850-19439 Capsella grandiflora
Cagra.4195s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold4195: 6850-16849 Capsella grandiflora
Cagra.4195s0007 10.0kb downstream 10.0kb downstream 12366 true Scaffold4195: 16850-29215 Capsella grandiflora
Cagra.4195s0007 10.0kb downstream 10.0kb downstream 9776 false Scaffold4195: 19440-29215 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041382 5273 Angiosperm View MSA
122379560 5261 Brassicaceae View MSA
123833032 5264 Brassicales-Malvales View MSA
124344887 5266 SBM View MSA
124251564 5268 Malvidae View MSA
124061285 5270 Rosid View MSA
123742081 5271 Pentapetalae View MSA
122789367 5272 Eudicot View MSA
121345997 5274 Embryophyte View MSA
123424581 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain