Gene : Cagra.4214s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR Genomic Order:  4
Name:  ? Cagra.4214s0004 Secondary Identifier:  ? PAC:28908531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4214s0004 0.5kb upstream 0.5kb upstream 3080 true Scaffold4214: 16983-20062 Capsella grandiflora
Cagra.4214s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4214: 16983-17482 Capsella grandiflora
Cagra.4214s0004 0.5kb downstream 0.5kb downstream 3080 true Scaffold4214: 17483-20562 Capsella grandiflora
Cagra.4214s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4214: 20063-20562 Capsella grandiflora
Cagra.4214s0004 1.0kb upstream 1.0kb upstream 3580 true Scaffold4214: 16483-20062 Capsella grandiflora
Cagra.4214s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4214: 16483-17482 Capsella grandiflora
Cagra.4214s0004 1.0kb downstream 1.0kb downstream 3580 true Scaffold4214: 17483-21062 Capsella grandiflora
Cagra.4214s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4214: 20063-21062 Capsella grandiflora
Cagra.4214s0004 2.0kb upstream 2.0kb upstream 4580 true Scaffold4214: 15483-20062 Capsella grandiflora
Cagra.4214s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4214: 15483-17482 Capsella grandiflora
Cagra.4214s0004 2.0kb downstream 2.0kb downstream 4580 true Scaffold4214: 17483-22062 Capsella grandiflora
Cagra.4214s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4214: 20063-22062 Capsella grandiflora
Cagra.4214s0004 5.0kb upstream 5.0kb upstream 7580 true Scaffold4214: 12483-20062 Capsella grandiflora
Cagra.4214s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4214: 12483-17482 Capsella grandiflora
Cagra.4214s0004 5.0kb downstream 5.0kb downstream 7580 true Scaffold4214: 17483-25062 Capsella grandiflora
Cagra.4214s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4214: 20063-25062 Capsella grandiflora
Cagra.4214s0004 10.0kb upstream 10.0kb upstream 12580 true Scaffold4214: 7483-20062 Capsella grandiflora
Cagra.4214s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4214: 7483-17482 Capsella grandiflora
Cagra.4214s0004 10.0kb downstream 10.0kb downstream 12580 true Scaffold4214: 17483-30062 Capsella grandiflora
Cagra.4214s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4214: 20063-30062 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333737 5261 Brassicaceae Singleton cluster - no MSA
123774650 5264 Brassicales-Malvales Singleton cluster - no MSA
124273082 5266 SBM Singleton cluster - no MSA
124255503 5268 Malvidae View MSA
123953193 5270 Rosid View MSA
123742127 5271 Pentapetalae View MSA
122793588 5272 Eudicot View MSA
122044258 5273 Angiosperm View MSA
121344643 5274 Embryophyte View MSA
123380078 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain