Gene : Cagra.4235s0005 C. grandiflora v1.1
Defline:  (1 of 1) KOG3219 - Transcription initiation factor TFIID, subunit TAF11 Genomic Order:  5
Name:  ? Cagra.4235s0005 Secondary Identifier:  ? PAC:28898207
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4235s0005 0.5kb upstream 0.5kb upstream 2007 true Scaffold4235: 20298-22304 Capsella grandiflora
Cagra.4235s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4235: 20298-20797 Capsella grandiflora
Cagra.4235s0005 0.5kb downstream 0.5kb downstream 2007 true Scaffold4235: 20798-22804 Capsella grandiflora
Cagra.4235s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4235: 22305-22804 Capsella grandiflora
Cagra.4235s0005 1.0kb upstream 1.0kb upstream 2507 true Scaffold4235: 19798-22304 Capsella grandiflora
Cagra.4235s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4235: 19798-20797 Capsella grandiflora
Cagra.4235s0005 1.0kb downstream 1.0kb downstream 2507 true Scaffold4235: 20798-23304 Capsella grandiflora
Cagra.4235s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4235: 22305-23304 Capsella grandiflora
Cagra.4235s0005 2.0kb upstream 2.0kb upstream 3507 true Scaffold4235: 18798-22304 Capsella grandiflora
Cagra.4235s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4235: 18798-20797 Capsella grandiflora
Cagra.4235s0005 2.0kb downstream 2.0kb downstream 3507 true Scaffold4235: 20798-24304 Capsella grandiflora
Cagra.4235s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4235: 22305-24304 Capsella grandiflora
Cagra.4235s0005 5.0kb upstream 5.0kb upstream 6507 true Scaffold4235: 15798-22304 Capsella grandiflora
Cagra.4235s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4235: 15798-20797 Capsella grandiflora
Cagra.4235s0005 5.0kb downstream 5.0kb downstream 6507 true Scaffold4235: 20798-27304 Capsella grandiflora
Cagra.4235s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4235: 22305-27304 Capsella grandiflora
Cagra.4235s0005 10.0kb upstream 10.0kb upstream 11507 true Scaffold4235: 10798-22304 Capsella grandiflora
Cagra.4235s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4235: 10798-20797 Capsella grandiflora
Cagra.4235s0005 10.0kb downstream 10.0kb downstream 11090 true Scaffold4235: 20798-31887 Capsella grandiflora
Cagra.4235s0005 10.0kb downstream 10.0kb downstream 9583 false Scaffold4235: 22305-31887 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367285 5261 Brassicaceae View MSA
123834056 5264 Brassicales-Malvales View MSA
124338047 5266 SBM View MSA
124241265 5268 Malvidae View MSA
124061468 5270 Rosid View MSA
123741122 5271 Pentapetalae View MSA
122793887 5272 Eudicot View MSA
122046222 5273 Angiosperm View MSA
121348235 5274 Embryophyte View MSA
123426477 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain