Gene : Cagra.4235s0006 C. grandiflora v1.1
Defline:  (1 of 9) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  6
Name:  ? Cagra.4235s0006 Secondary Identifier:  ? PAC:28898209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4235s0006 0.5kb upstream 0.5kb upstream 4055 true Scaffold4235: 22281-26335 Capsella grandiflora
Cagra.4235s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold4235: 22281-22780 Capsella grandiflora
Cagra.4235s0006 0.5kb downstream 0.5kb downstream 4055 true Scaffold4235: 22781-26835 Capsella grandiflora
Cagra.4235s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold4235: 26336-26835 Capsella grandiflora
Cagra.4235s0006 1.0kb upstream 1.0kb upstream 4555 true Scaffold4235: 21781-26335 Capsella grandiflora
Cagra.4235s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold4235: 21781-22780 Capsella grandiflora
Cagra.4235s0006 1.0kb downstream 1.0kb downstream 4555 true Scaffold4235: 22781-27335 Capsella grandiflora
Cagra.4235s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold4235: 26336-27335 Capsella grandiflora
Cagra.4235s0006 2.0kb upstream 2.0kb upstream 5555 true Scaffold4235: 20781-26335 Capsella grandiflora
Cagra.4235s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold4235: 20781-22780 Capsella grandiflora
Cagra.4235s0006 2.0kb downstream 2.0kb downstream 5555 true Scaffold4235: 22781-28335 Capsella grandiflora
Cagra.4235s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold4235: 26336-28335 Capsella grandiflora
Cagra.4235s0006 5.0kb upstream 5.0kb upstream 8555 true Scaffold4235: 17781-26335 Capsella grandiflora
Cagra.4235s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold4235: 17781-22780 Capsella grandiflora
Cagra.4235s0006 5.0kb downstream 5.0kb downstream 8555 true Scaffold4235: 22781-31335 Capsella grandiflora
Cagra.4235s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold4235: 26336-31335 Capsella grandiflora
Cagra.4235s0006 10.0kb upstream 10.0kb upstream 13555 true Scaffold4235: 12781-26335 Capsella grandiflora
Cagra.4235s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold4235: 12781-22780 Capsella grandiflora
Cagra.4235s0006 10.0kb downstream 10.0kb downstream 9107 true Scaffold4235: 22781-31887 Capsella grandiflora
Cagra.4235s0006 10.0kb downstream 10.0kb downstream 5552 false Scaffold4235: 26336-31887 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374818 5261 Brassicaceae View MSA
123838359 5264 Brassicales-Malvales View MSA
124348413 5266 SBM View MSA
124245958 5268 Malvidae View MSA
124068290 5270 Rosid View MSA
123746076 5271 Pentapetalae View MSA
122796883 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain