Gene : Cagra.6133s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11262:SF4 - ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL Genomic Order:  25
Name:  ? Cagra.6133s0025 Secondary Identifier:  ? PAC:28918574
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6133s0025 0.5kb upstream 0.5kb upstream 4786 true Scaffold6133: 84665-89450 Capsella grandiflora
Cagra.6133s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold6133: 88951-89450 Capsella grandiflora
Cagra.6133s0025 0.5kb downstream 0.5kb downstream 4786 true Scaffold6133: 84165-88950 Capsella grandiflora
Cagra.6133s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold6133: 84165-84664 Capsella grandiflora
Cagra.6133s0025 1.0kb upstream 1.0kb upstream 5286 true Scaffold6133: 84665-89950 Capsella grandiflora
Cagra.6133s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold6133: 88951-89950 Capsella grandiflora
Cagra.6133s0025 1.0kb downstream 1.0kb downstream 5286 true Scaffold6133: 83665-88950 Capsella grandiflora
Cagra.6133s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold6133: 83665-84664 Capsella grandiflora
Cagra.6133s0025 2.0kb upstream 2.0kb upstream 6286 true Scaffold6133: 84665-90950 Capsella grandiflora
Cagra.6133s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold6133: 88951-90950 Capsella grandiflora
Cagra.6133s0025 2.0kb downstream 2.0kb downstream 6286 true Scaffold6133: 82665-88950 Capsella grandiflora
Cagra.6133s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold6133: 82665-84664 Capsella grandiflora
Cagra.6133s0025 5.0kb upstream 5.0kb upstream 9286 true Scaffold6133: 84665-93950 Capsella grandiflora
Cagra.6133s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold6133: 88951-93950 Capsella grandiflora
Cagra.6133s0025 5.0kb downstream 5.0kb downstream 9286 true Scaffold6133: 79665-88950 Capsella grandiflora
Cagra.6133s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold6133: 79665-84664 Capsella grandiflora
Cagra.6133s0025 10.0kb upstream 10.0kb upstream 14286 true Scaffold6133: 84665-98950 Capsella grandiflora
Cagra.6133s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold6133: 88951-98950 Capsella grandiflora
Cagra.6133s0025 10.0kb downstream 10.0kb downstream 14286 true Scaffold6133: 74665-88950 Capsella grandiflora
Cagra.6133s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold6133: 74665-84664 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371904 5261 Brassicaceae View MSA
123832820 5264 Brassicales-Malvales View MSA
124344849 5266 SBM View MSA
124238610 5268 Malvidae View MSA
124069247 5270 Rosid View MSA
123739366 5271 Pentapetalae View MSA
122793797 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain