Gene : Cagra.5249s0022 C. grandiflora v1.1
Defline:  (1 of 19) PTHR31589:SF17 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  22
Name:  ? Cagra.5249s0022 Secondary Identifier:  ? PAC:28918120
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5249s0022 0.5kb upstream 0.5kb upstream 2240 true Scaffold5249: 78739-80978 Capsella grandiflora
Cagra.5249s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold5249: 78739-79238 Capsella grandiflora
Cagra.5249s0022 0.5kb downstream 0.5kb downstream 2240 true Scaffold5249: 79239-81478 Capsella grandiflora
Cagra.5249s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold5249: 80979-81478 Capsella grandiflora
Cagra.5249s0022 1.0kb upstream 1.0kb upstream 2740 true Scaffold5249: 78239-80978 Capsella grandiflora
Cagra.5249s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold5249: 78239-79238 Capsella grandiflora
Cagra.5249s0022 1.0kb downstream 1.0kb downstream 2740 true Scaffold5249: 79239-81978 Capsella grandiflora
Cagra.5249s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold5249: 80979-81978 Capsella grandiflora
Cagra.5249s0022 2.0kb upstream 2.0kb upstream 3740 true Scaffold5249: 77239-80978 Capsella grandiflora
Cagra.5249s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold5249: 77239-79238 Capsella grandiflora
Cagra.5249s0022 2.0kb downstream 2.0kb downstream 3740 true Scaffold5249: 79239-82978 Capsella grandiflora
Cagra.5249s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold5249: 80979-82978 Capsella grandiflora
Cagra.5249s0022 5.0kb upstream 5.0kb upstream 6740 true Scaffold5249: 74239-80978 Capsella grandiflora
Cagra.5249s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold5249: 74239-79238 Capsella grandiflora
Cagra.5249s0022 5.0kb downstream 5.0kb downstream 6740 true Scaffold5249: 79239-85978 Capsella grandiflora
Cagra.5249s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold5249: 80979-85978 Capsella grandiflora
Cagra.5249s0022 10.0kb upstream 10.0kb upstream 11740 true Scaffold5249: 69239-80978 Capsella grandiflora
Cagra.5249s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold5249: 69239-79238 Capsella grandiflora
Cagra.5249s0022 10.0kb downstream 10.0kb downstream 11740 true Scaffold5249: 79239-90978 Capsella grandiflora
Cagra.5249s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold5249: 80979-90978 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380303 5261 Brassicaceae View MSA
123802645 5264 Brassicales-Malvales View MSA
124299826 5266 SBM View MSA
124151141 5268 Malvidae View MSA
123876641 5270 Rosid View MSA
123754853 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain