Gene : Cagra.5253s0001 C. grandiflora v1.1
Genomic Order:  1 Name:  ? Cagra.5253s0001
Secondary Identifier:  ? PAC:28906650
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5253s0001 0.5kb upstream 0.5kb upstream 2547 true Scaffold5253: 5791-8337 Capsella grandiflora
Cagra.5253s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5253: 5791-6290 Capsella grandiflora
Cagra.5253s0001 0.5kb downstream 0.5kb downstream 2547 true Scaffold5253: 6291-8837 Capsella grandiflora
Cagra.5253s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5253: 8338-8837 Capsella grandiflora
Cagra.5253s0001 1.0kb upstream 1.0kb upstream 3047 true Scaffold5253: 5291-8337 Capsella grandiflora
Cagra.5253s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5253: 5291-6290 Capsella grandiflora
Cagra.5253s0001 1.0kb downstream 1.0kb downstream 3047 true Scaffold5253: 6291-9337 Capsella grandiflora
Cagra.5253s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5253: 8338-9337 Capsella grandiflora
Cagra.5253s0001 2.0kb upstream 2.0kb upstream 4047 true Scaffold5253: 4291-8337 Capsella grandiflora
Cagra.5253s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5253: 4291-6290 Capsella grandiflora
Cagra.5253s0001 2.0kb downstream 2.0kb downstream 4047 true Scaffold5253: 6291-10337 Capsella grandiflora
Cagra.5253s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5253: 8338-10337 Capsella grandiflora
Cagra.5253s0001 5.0kb upstream 5.0kb upstream 7047 true Scaffold5253: 1291-8337 Capsella grandiflora
Cagra.5253s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5253: 1291-6290 Capsella grandiflora
Cagra.5253s0001 5.0kb downstream 5.0kb downstream 7047 true Scaffold5253: 6291-13337 Capsella grandiflora
Cagra.5253s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5253: 8338-13337 Capsella grandiflora
Cagra.5253s0001 10.0kb upstream 10.0kb upstream 8337 true Scaffold5253: 1-8337 Capsella grandiflora
Cagra.5253s0001 10.0kb upstream 10.0kb upstream 6290 false Scaffold5253: 1-6290 Capsella grandiflora
Cagra.5253s0001 10.0kb downstream 10.0kb downstream 7862 true Scaffold5253: 6291-14152 Capsella grandiflora
Cagra.5253s0001 10.0kb downstream 10.0kb downstream 5815 false Scaffold5253: 8338-14152 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360678 5261 Brassicaceae View MSA
123833408 5264 Brassicales-Malvales View MSA
124345496 5266 SBM View MSA
124237524 5268 Malvidae View MSA
124064413 5270 Rosid View MSA
123743072 5271 Pentapetalae View MSA
122789206 5272 Eudicot View MSA
122045769 5273 Angiosperm View MSA
121344734 5274 Embryophyte View MSA
123380092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain