Gene : Cagra.5286s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10766:SF54 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  1
Name:  ? Cagra.5286s0001 Secondary Identifier:  ? PAC:28895177
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5286s0001 0.5kb upstream 0.5kb upstream 2695 true Scaffold5286: 3249-5943 Capsella grandiflora
Cagra.5286s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5286: 5444-5943 Capsella grandiflora
Cagra.5286s0001 0.5kb downstream 0.5kb downstream 2695 true Scaffold5286: 2749-5443 Capsella grandiflora
Cagra.5286s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5286: 2749-3248 Capsella grandiflora
Cagra.5286s0001 1.0kb upstream 1.0kb upstream 3195 true Scaffold5286: 3249-6443 Capsella grandiflora
Cagra.5286s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5286: 5444-6443 Capsella grandiflora
Cagra.5286s0001 1.0kb downstream 1.0kb downstream 3195 true Scaffold5286: 2249-5443 Capsella grandiflora
Cagra.5286s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5286: 2249-3248 Capsella grandiflora
Cagra.5286s0001 2.0kb upstream 2.0kb upstream 4195 true Scaffold5286: 3249-7443 Capsella grandiflora
Cagra.5286s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5286: 5444-7443 Capsella grandiflora
Cagra.5286s0001 2.0kb downstream 2.0kb downstream 4195 true Scaffold5286: 1249-5443 Capsella grandiflora
Cagra.5286s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5286: 1249-3248 Capsella grandiflora
Cagra.5286s0001 5.0kb upstream 5.0kb upstream 7053 true Scaffold5286: 3249-10301 Capsella grandiflora
Cagra.5286s0001 5.0kb upstream 5.0kb upstream 4858 false Scaffold5286: 5444-10301 Capsella grandiflora
Cagra.5286s0001 5.0kb downstream 5.0kb downstream 5443 true Scaffold5286: 1-5443 Capsella grandiflora
Cagra.5286s0001 5.0kb downstream 5.0kb downstream 3248 false Scaffold5286: 1-3248 Capsella grandiflora
Cagra.5286s0001 10.0kb upstream 10.0kb upstream 7053 true Scaffold5286: 3249-10301 Capsella grandiflora
Cagra.5286s0001 10.0kb upstream 10.0kb upstream 4858 false Scaffold5286: 5444-10301 Capsella grandiflora
Cagra.5286s0001 10.0kb downstream 10.0kb downstream 5443 true Scaffold5286: 1-5443 Capsella grandiflora
Cagra.5286s0001 10.0kb downstream 10.0kb downstream 3248 false Scaffold5286: 1-3248 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367073 5261 Brassicaceae View MSA
123830060 5264 Brassicales-Malvales View MSA
124338777 5266 SBM View MSA
124240989 5268 Malvidae View MSA
124063523 5270 Rosid View MSA
123747213 5271 Pentapetalae View MSA
122787756 5272 Eudicot View MSA
122045331 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain