Gene : Cagra.5323s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23324//PTHR23324:SF80 - SEC14 RELATED PROTEIN Genomic Order:  11
Name:  ? Cagra.5323s0011 Secondary Identifier:  ? PAC:28917296
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5323s0011 0.5kb upstream 0.5kb upstream 3114 true Scaffold5323: 35973-39086 Capsella grandiflora
Cagra.5323s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold5323: 38587-39086 Capsella grandiflora
Cagra.5323s0011 0.5kb downstream 0.5kb downstream 3114 true Scaffold5323: 35473-38586 Capsella grandiflora
Cagra.5323s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold5323: 35473-35972 Capsella grandiflora
Cagra.5323s0011 1.0kb upstream 1.0kb upstream 3614 true Scaffold5323: 35973-39586 Capsella grandiflora
Cagra.5323s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold5323: 38587-39586 Capsella grandiflora
Cagra.5323s0011 1.0kb downstream 1.0kb downstream 3614 true Scaffold5323: 34973-38586 Capsella grandiflora
Cagra.5323s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold5323: 34973-35972 Capsella grandiflora
Cagra.5323s0011 2.0kb upstream 2.0kb upstream 4614 true Scaffold5323: 35973-40586 Capsella grandiflora
Cagra.5323s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold5323: 38587-40586 Capsella grandiflora
Cagra.5323s0011 2.0kb downstream 2.0kb downstream 4614 true Scaffold5323: 33973-38586 Capsella grandiflora
Cagra.5323s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold5323: 33973-35972 Capsella grandiflora
Cagra.5323s0011 5.0kb upstream 5.0kb upstream 7614 true Scaffold5323: 35973-43586 Capsella grandiflora
Cagra.5323s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold5323: 38587-43586 Capsella grandiflora
Cagra.5323s0011 5.0kb downstream 5.0kb downstream 7614 true Scaffold5323: 30973-38586 Capsella grandiflora
Cagra.5323s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold5323: 30973-35972 Capsella grandiflora
Cagra.5323s0011 10.0kb upstream 10.0kb upstream 12614 true Scaffold5323: 35973-48586 Capsella grandiflora
Cagra.5323s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold5323: 38587-48586 Capsella grandiflora
Cagra.5323s0011 10.0kb downstream 10.0kb downstream 12614 true Scaffold5323: 25973-38586 Capsella grandiflora
Cagra.5323s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold5323: 25973-35972 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368367 5261 Brassicaceae View MSA
123837228 5264 Brassicales-Malvales View MSA
124346703 5266 SBM View MSA
124246397 5268 Malvidae View MSA
124069493 5270 Rosid View MSA
123748000 5271 Pentapetalae View MSA
122789594 5272 Eudicot View MSA
122049959 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350839 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain