Gene : Cagra.5118s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15561 - CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN Genomic Order:  28
Name:  ? Cagra.5118s0028 Secondary Identifier:  ? PAC:28905940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5118s0028 0.5kb upstream 0.5kb upstream 1796 true Scaffold5118: 117017-118812 Capsella grandiflora
Cagra.5118s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold5118: 118313-118812 Capsella grandiflora
Cagra.5118s0028 0.5kb downstream 0.5kb downstream 1796 true Scaffold5118: 116517-118312 Capsella grandiflora
Cagra.5118s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold5118: 116517-117016 Capsella grandiflora
Cagra.5118s0028 1.0kb upstream 1.0kb upstream 2296 true Scaffold5118: 117017-119312 Capsella grandiflora
Cagra.5118s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold5118: 118313-119312 Capsella grandiflora
Cagra.5118s0028 1.0kb downstream 1.0kb downstream 2296 true Scaffold5118: 116017-118312 Capsella grandiflora
Cagra.5118s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold5118: 116017-117016 Capsella grandiflora
Cagra.5118s0028 2.0kb upstream 2.0kb upstream 3296 true Scaffold5118: 117017-120312 Capsella grandiflora
Cagra.5118s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold5118: 118313-120312 Capsella grandiflora
Cagra.5118s0028 2.0kb downstream 2.0kb downstream 3296 true Scaffold5118: 115017-118312 Capsella grandiflora
Cagra.5118s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold5118: 115017-117016 Capsella grandiflora
Cagra.5118s0028 5.0kb upstream 5.0kb upstream 6296 true Scaffold5118: 117017-123312 Capsella grandiflora
Cagra.5118s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold5118: 118313-123312 Capsella grandiflora
Cagra.5118s0028 5.0kb downstream 5.0kb downstream 6296 true Scaffold5118: 112017-118312 Capsella grandiflora
Cagra.5118s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold5118: 112017-117016 Capsella grandiflora
Cagra.5118s0028 10.0kb upstream 10.0kb upstream 11296 true Scaffold5118: 117017-128312 Capsella grandiflora
Cagra.5118s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold5118: 118313-128312 Capsella grandiflora
Cagra.5118s0028 10.0kb downstream 10.0kb downstream 11296 true Scaffold5118: 107017-118312 Capsella grandiflora
Cagra.5118s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold5118: 107017-117016 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380428 5261 Brassicaceae View MSA
123802711 5264 Brassicales-Malvales View MSA
124339362 5266 SBM View MSA
124241908 5268 Malvidae View MSA
124063506 5270 Rosid View MSA
123740278 5271 Pentapetalae View MSA
122796140 5272 Eudicot View MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain