Gene : Cagra.5118s0036 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10168:SF73 - GLUTAREDOXIN-C1 Genomic Order:  36
Name:  ? Cagra.5118s0036 Secondary Identifier:  ? PAC:28905930
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5118s0036 0.5kb upstream 0.5kb upstream 2051 true Scaffold5118: 137850-139900 Capsella grandiflora
Cagra.5118s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold5118: 139401-139900 Capsella grandiflora
Cagra.5118s0036 0.5kb downstream 0.5kb downstream 2051 true Scaffold5118: 137350-139400 Capsella grandiflora
Cagra.5118s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold5118: 137350-137849 Capsella grandiflora
Cagra.5118s0036 1.0kb upstream 1.0kb upstream 2551 true Scaffold5118: 137850-140400 Capsella grandiflora
Cagra.5118s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold5118: 139401-140400 Capsella grandiflora
Cagra.5118s0036 1.0kb downstream 1.0kb downstream 2551 true Scaffold5118: 136850-139400 Capsella grandiflora
Cagra.5118s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold5118: 136850-137849 Capsella grandiflora
Cagra.5118s0036 2.0kb upstream 2.0kb upstream 3551 true Scaffold5118: 137850-141400 Capsella grandiflora
Cagra.5118s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold5118: 139401-141400 Capsella grandiflora
Cagra.5118s0036 2.0kb downstream 2.0kb downstream 3551 true Scaffold5118: 135850-139400 Capsella grandiflora
Cagra.5118s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold5118: 135850-137849 Capsella grandiflora
Cagra.5118s0036 5.0kb upstream 5.0kb upstream 6551 true Scaffold5118: 137850-144400 Capsella grandiflora
Cagra.5118s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold5118: 139401-144400 Capsella grandiflora
Cagra.5118s0036 5.0kb downstream 5.0kb downstream 6551 true Scaffold5118: 132850-139400 Capsella grandiflora
Cagra.5118s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold5118: 132850-137849 Capsella grandiflora
Cagra.5118s0036 10.0kb upstream 10.0kb upstream 11551 true Scaffold5118: 137850-149400 Capsella grandiflora
Cagra.5118s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold5118: 139401-149400 Capsella grandiflora
Cagra.5118s0036 10.0kb downstream 10.0kb downstream 11551 true Scaffold5118: 127850-139400 Capsella grandiflora
Cagra.5118s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold5118: 127850-137849 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369652 5261 Brassicaceae View MSA
123840210 5264 Brassicales-Malvales View MSA
124341739 5266 SBM View MSA
124243445 5268 Malvidae View MSA
124060631 5270 Rosid View MSA
123740735 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain