Gene : Cagra.5146s0002 C. grandiflora v1.1
Defline:  (1 of 47) PF00892 - EamA-like transporter family (EamA) Genomic Order:  2
Name:  ? Cagra.5146s0002 Secondary Identifier:  ? PAC:28895284
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5146s0002 0.5kb upstream 0.5kb upstream 2918 true Scaffold5146: 5922-8839 Capsella grandiflora
Cagra.5146s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5146: 8340-8839 Capsella grandiflora
Cagra.5146s0002 0.5kb downstream 0.5kb downstream 2918 true Scaffold5146: 5422-8339 Capsella grandiflora
Cagra.5146s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5146: 5422-5921 Capsella grandiflora
Cagra.5146s0002 1.0kb upstream 1.0kb upstream 3418 true Scaffold5146: 5922-9339 Capsella grandiflora
Cagra.5146s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5146: 8340-9339 Capsella grandiflora
Cagra.5146s0002 1.0kb downstream 1.0kb downstream 3418 true Scaffold5146: 4922-8339 Capsella grandiflora
Cagra.5146s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5146: 4922-5921 Capsella grandiflora
Cagra.5146s0002 2.0kb upstream 2.0kb upstream 4418 true Scaffold5146: 5922-10339 Capsella grandiflora
Cagra.5146s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5146: 8340-10339 Capsella grandiflora
Cagra.5146s0002 2.0kb downstream 2.0kb downstream 4418 true Scaffold5146: 3922-8339 Capsella grandiflora
Cagra.5146s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5146: 3922-5921 Capsella grandiflora
Cagra.5146s0002 5.0kb upstream 5.0kb upstream 7418 true Scaffold5146: 5922-13339 Capsella grandiflora
Cagra.5146s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5146: 8340-13339 Capsella grandiflora
Cagra.5146s0002 5.0kb downstream 5.0kb downstream 7418 true Scaffold5146: 922-8339 Capsella grandiflora
Cagra.5146s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5146: 922-5921 Capsella grandiflora
Cagra.5146s0002 10.0kb upstream 10.0kb upstream 12418 true Scaffold5146: 5922-18339 Capsella grandiflora
Cagra.5146s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5146: 8340-18339 Capsella grandiflora
Cagra.5146s0002 10.0kb downstream 10.0kb downstream 8339 true Scaffold5146: 1-8339 Capsella grandiflora
Cagra.5146s0002 10.0kb downstream 10.0kb downstream 5921 false Scaffold5146: 1-5921 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364700 5261 Brassicaceae View MSA
123829523 5264 Brassicales-Malvales View MSA
124350712 5266 SBM View MSA
124251502 5268 Malvidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain