Gene : Cagra.5163s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR20932:SF8 - PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN Genomic Order:  11
Name:  ? Cagra.5163s0011 Secondary Identifier:  ? PAC:28907192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5163s0011 0.5kb upstream 0.5kb upstream 2522 true Scaffold5163: 53217-55738 Capsella grandiflora
Cagra.5163s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold5163: 53217-53716 Capsella grandiflora
Cagra.5163s0011 0.5kb downstream 0.5kb downstream 2522 true Scaffold5163: 53717-56238 Capsella grandiflora
Cagra.5163s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold5163: 55739-56238 Capsella grandiflora
Cagra.5163s0011 1.0kb upstream 1.0kb upstream 3022 true Scaffold5163: 52717-55738 Capsella grandiflora
Cagra.5163s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold5163: 52717-53716 Capsella grandiflora
Cagra.5163s0011 1.0kb downstream 1.0kb downstream 3022 true Scaffold5163: 53717-56738 Capsella grandiflora
Cagra.5163s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold5163: 55739-56738 Capsella grandiflora
Cagra.5163s0011 2.0kb upstream 2.0kb upstream 4022 true Scaffold5163: 51717-55738 Capsella grandiflora
Cagra.5163s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold5163: 51717-53716 Capsella grandiflora
Cagra.5163s0011 2.0kb downstream 2.0kb downstream 4022 true Scaffold5163: 53717-57738 Capsella grandiflora
Cagra.5163s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold5163: 55739-57738 Capsella grandiflora
Cagra.5163s0011 5.0kb upstream 5.0kb upstream 7022 true Scaffold5163: 48717-55738 Capsella grandiflora
Cagra.5163s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold5163: 48717-53716 Capsella grandiflora
Cagra.5163s0011 5.0kb downstream 5.0kb downstream 7022 true Scaffold5163: 53717-60738 Capsella grandiflora
Cagra.5163s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold5163: 55739-60738 Capsella grandiflora
Cagra.5163s0011 10.0kb upstream 10.0kb upstream 12022 true Scaffold5163: 43717-55738 Capsella grandiflora
Cagra.5163s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold5163: 43717-53716 Capsella grandiflora
Cagra.5163s0011 10.0kb downstream 10.0kb downstream 12022 true Scaffold5163: 53717-65738 Capsella grandiflora
Cagra.5163s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold5163: 55739-65738 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040928 5273 Angiosperm View MSA
122368872 5261 Brassicaceae View MSA
123840359 5264 Brassicales-Malvales View MSA
124346136 5266 SBM View MSA
124254251 5268 Malvidae View MSA
124070010 5270 Rosid View MSA
123744886 5271 Pentapetalae View MSA
122793061 5272 Eudicot View MSA
121350889 5274 Embryophyte View MSA
123426344 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain