Gene : Cagra.5249s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24177:SF32 - ANKYRIN REPEAT FAMILY PROTEIN Genomic Order:  8
Name:  ? Cagra.5249s0008 Secondary Identifier:  ? PAC:28918107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5249s0008 0.5kb upstream 0.5kb upstream 6655 true Scaffold5249: 22263-28917 Capsella grandiflora
Cagra.5249s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold5249: 28418-28917 Capsella grandiflora
Cagra.5249s0008 0.5kb downstream 0.5kb downstream 6655 true Scaffold5249: 21763-28417 Capsella grandiflora
Cagra.5249s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold5249: 21763-22262 Capsella grandiflora
Cagra.5249s0008 1.0kb upstream 1.0kb upstream 7155 true Scaffold5249: 22263-29417 Capsella grandiflora
Cagra.5249s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold5249: 28418-29417 Capsella grandiflora
Cagra.5249s0008 1.0kb downstream 1.0kb downstream 7155 true Scaffold5249: 21263-28417 Capsella grandiflora
Cagra.5249s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold5249: 21263-22262 Capsella grandiflora
Cagra.5249s0008 2.0kb upstream 2.0kb upstream 8155 true Scaffold5249: 22263-30417 Capsella grandiflora
Cagra.5249s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold5249: 28418-30417 Capsella grandiflora
Cagra.5249s0008 2.0kb downstream 2.0kb downstream 8155 true Scaffold5249: 20263-28417 Capsella grandiflora
Cagra.5249s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold5249: 20263-22262 Capsella grandiflora
Cagra.5249s0008 5.0kb upstream 5.0kb upstream 11155 true Scaffold5249: 22263-33417 Capsella grandiflora
Cagra.5249s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold5249: 28418-33417 Capsella grandiflora
Cagra.5249s0008 5.0kb downstream 5.0kb downstream 11155 true Scaffold5249: 17263-28417 Capsella grandiflora
Cagra.5249s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold5249: 17263-22262 Capsella grandiflora
Cagra.5249s0008 10.0kb upstream 10.0kb upstream 16155 true Scaffold5249: 22263-38417 Capsella grandiflora
Cagra.5249s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold5249: 28418-38417 Capsella grandiflora
Cagra.5249s0008 10.0kb downstream 10.0kb downstream 16155 true Scaffold5249: 12263-28417 Capsella grandiflora
Cagra.5249s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold5249: 12263-22262 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372346 5261 Brassicaceae View MSA
123800341 5264 Brassicales-Malvales View MSA
124297762 5266 SBM View MSA
124254356 5268 Malvidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain