Gene : Cagra.5070s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24326:SF294 - HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED Genomic Order:  5
Name:  ? Cagra.5070s0005 Secondary Identifier:  ? PAC:28901587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5070s0005 0.5kb upstream 0.5kb upstream 6399 true Scaffold5070: 15720-22118 Capsella grandiflora
Cagra.5070s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5070: 21619-22118 Capsella grandiflora
Cagra.5070s0005 0.5kb downstream 0.5kb downstream 6399 true Scaffold5070: 15220-21618 Capsella grandiflora
Cagra.5070s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5070: 15220-15719 Capsella grandiflora
Cagra.5070s0005 1.0kb upstream 1.0kb upstream 6899 true Scaffold5070: 15720-22618 Capsella grandiflora
Cagra.5070s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5070: 21619-22618 Capsella grandiflora
Cagra.5070s0005 1.0kb downstream 1.0kb downstream 6899 true Scaffold5070: 14720-21618 Capsella grandiflora
Cagra.5070s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5070: 14720-15719 Capsella grandiflora
Cagra.5070s0005 2.0kb upstream 2.0kb upstream 7899 true Scaffold5070: 15720-23618 Capsella grandiflora
Cagra.5070s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5070: 21619-23618 Capsella grandiflora
Cagra.5070s0005 2.0kb downstream 2.0kb downstream 7899 true Scaffold5070: 13720-21618 Capsella grandiflora
Cagra.5070s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5070: 13720-15719 Capsella grandiflora
Cagra.5070s0005 5.0kb upstream 5.0kb upstream 10899 true Scaffold5070: 15720-26618 Capsella grandiflora
Cagra.5070s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5070: 21619-26618 Capsella grandiflora
Cagra.5070s0005 5.0kb downstream 5.0kb downstream 10899 true Scaffold5070: 10720-21618 Capsella grandiflora
Cagra.5070s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5070: 10720-15719 Capsella grandiflora
Cagra.5070s0005 10.0kb upstream 10.0kb upstream 15899 true Scaffold5070: 15720-31618 Capsella grandiflora
Cagra.5070s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5070: 21619-31618 Capsella grandiflora
Cagra.5070s0005 10.0kb downstream 10.0kb downstream 15899 true Scaffold5070: 5720-21618 Capsella grandiflora
Cagra.5070s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold5070: 5720-15719 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373715 5261 Brassicaceae View MSA
123838055 5264 Brassicales-Malvales View MSA
124338505 5266 SBM View MSA
124240663 5268 Malvidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain