Gene : Cagra.5070s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23078 - VESICULAR-FUSION PROTEIN NSF Genomic Order:  7
Name:  ? Cagra.5070s0007 Secondary Identifier:  ? PAC:28901595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5070s0007 0.5kb upstream 0.5kb upstream 6425 true Scaffold5070: 27435-33859 Capsella grandiflora
Cagra.5070s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold5070: 33360-33859 Capsella grandiflora
Cagra.5070s0007 0.5kb downstream 0.5kb downstream 6425 true Scaffold5070: 26935-33359 Capsella grandiflora
Cagra.5070s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold5070: 26935-27434 Capsella grandiflora
Cagra.5070s0007 1.0kb upstream 1.0kb upstream 6925 true Scaffold5070: 27435-34359 Capsella grandiflora
Cagra.5070s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold5070: 33360-34359 Capsella grandiflora
Cagra.5070s0007 1.0kb downstream 1.0kb downstream 6925 true Scaffold5070: 26435-33359 Capsella grandiflora
Cagra.5070s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold5070: 26435-27434 Capsella grandiflora
Cagra.5070s0007 2.0kb upstream 2.0kb upstream 7925 true Scaffold5070: 27435-35359 Capsella grandiflora
Cagra.5070s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold5070: 33360-35359 Capsella grandiflora
Cagra.5070s0007 2.0kb downstream 2.0kb downstream 7925 true Scaffold5070: 25435-33359 Capsella grandiflora
Cagra.5070s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold5070: 25435-27434 Capsella grandiflora
Cagra.5070s0007 5.0kb upstream 5.0kb upstream 10925 true Scaffold5070: 27435-38359 Capsella grandiflora
Cagra.5070s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold5070: 33360-38359 Capsella grandiflora
Cagra.5070s0007 5.0kb downstream 5.0kb downstream 10925 true Scaffold5070: 22435-33359 Capsella grandiflora
Cagra.5070s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold5070: 22435-27434 Capsella grandiflora
Cagra.5070s0007 10.0kb upstream 10.0kb upstream 15925 true Scaffold5070: 27435-43359 Capsella grandiflora
Cagra.5070s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold5070: 33360-43359 Capsella grandiflora
Cagra.5070s0007 10.0kb downstream 10.0kb downstream 15925 true Scaffold5070: 17435-33359 Capsella grandiflora
Cagra.5070s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold5070: 17435-27434 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364563 5261 Brassicaceae View MSA
123839839 5264 Brassicales-Malvales View MSA
124343422 5266 SBM View MSA
124238930 5268 Malvidae View MSA
124065880 5270 Rosid View MSA
123748878 5271 Pentapetalae View MSA
122787277 5272 Eudicot View MSA
122044573 5273 Angiosperm View MSA
121350302 5274 Embryophyte View MSA
123424602 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain