Gene : Cagra.5211s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13718//PTHR13718:SF63 - RIBOSOMAL S SUBUNIT Genomic Order:  1
Name:  ? Cagra.5211s0001 Secondary Identifier:  ? PAC:28897911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5211s0001 0.5kb upstream 0.5kb upstream 4176 true Scaffold5211: 2790-6965 Capsella grandiflora
Cagra.5211s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5211: 2790-3289 Capsella grandiflora
Cagra.5211s0001 0.5kb downstream 0.5kb downstream 4176 true Scaffold5211: 3290-7465 Capsella grandiflora
Cagra.5211s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5211: 6966-7465 Capsella grandiflora
Cagra.5211s0001 1.0kb upstream 1.0kb upstream 4676 true Scaffold5211: 2290-6965 Capsella grandiflora
Cagra.5211s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5211: 2290-3289 Capsella grandiflora
Cagra.5211s0001 1.0kb downstream 1.0kb downstream 4676 true Scaffold5211: 3290-7965 Capsella grandiflora
Cagra.5211s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5211: 6966-7965 Capsella grandiflora
Cagra.5211s0001 2.0kb upstream 2.0kb upstream 5676 true Scaffold5211: 1290-6965 Capsella grandiflora
Cagra.5211s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5211: 1290-3289 Capsella grandiflora
Cagra.5211s0001 2.0kb downstream 2.0kb downstream 5676 true Scaffold5211: 3290-8965 Capsella grandiflora
Cagra.5211s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5211: 6966-8965 Capsella grandiflora
Cagra.5211s0001 5.0kb upstream 5.0kb upstream 6965 true Scaffold5211: 1-6965 Capsella grandiflora
Cagra.5211s0001 5.0kb upstream 5.0kb upstream 3289 false Scaffold5211: 1-3289 Capsella grandiflora
Cagra.5211s0001 5.0kb downstream 5.0kb downstream 8676 true Scaffold5211: 3290-11965 Capsella grandiflora
Cagra.5211s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5211: 6966-11965 Capsella grandiflora
Cagra.5211s0001 10.0kb upstream 10.0kb upstream 6965 true Scaffold5211: 1-6965 Capsella grandiflora
Cagra.5211s0001 10.0kb upstream 10.0kb upstream 3289 false Scaffold5211: 1-3289 Capsella grandiflora
Cagra.5211s0001 10.0kb downstream 10.0kb downstream 13676 true Scaffold5211: 3290-16965 Capsella grandiflora
Cagra.5211s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5211: 6966-16965 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365298 5261 Brassicaceae View MSA
123834053 5264 Brassicales-Malvales View MSA
124342927 5266 SBM View MSA
124237635 5268 Malvidae View MSA
124063452 5270 Rosid View MSA
123741085 5271 Pentapetalae View MSA
122790036 5272 Eudicot View MSA
122044726 5273 Angiosperm View MSA
121349200 5274 Embryophyte View MSA
123426297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain