Gene : Cagra.5118s0002 C. grandiflora v1.1
Defline:  (1 of 1) KOG4672 - Uncharacterized conserved low complexity protein Genomic Order:  2
Name:  ? Cagra.5118s0002 Secondary Identifier:  ? PAC:28905924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5118s0002 0.5kb upstream 0.5kb upstream 3692 true Scaffold5118: 6084-9775 Capsella grandiflora
Cagra.5118s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5118: 9276-9775 Capsella grandiflora
Cagra.5118s0002 0.5kb downstream 0.5kb downstream 3692 true Scaffold5118: 5584-9275 Capsella grandiflora
Cagra.5118s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5118: 5584-6083 Capsella grandiflora
Cagra.5118s0002 1.0kb upstream 1.0kb upstream 4192 true Scaffold5118: 6084-10275 Capsella grandiflora
Cagra.5118s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5118: 9276-10275 Capsella grandiflora
Cagra.5118s0002 1.0kb downstream 1.0kb downstream 4192 true Scaffold5118: 5084-9275 Capsella grandiflora
Cagra.5118s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5118: 5084-6083 Capsella grandiflora
Cagra.5118s0002 2.0kb upstream 2.0kb upstream 5192 true Scaffold5118: 6084-11275 Capsella grandiflora
Cagra.5118s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5118: 9276-11275 Capsella grandiflora
Cagra.5118s0002 2.0kb downstream 2.0kb downstream 5192 true Scaffold5118: 4084-9275 Capsella grandiflora
Cagra.5118s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5118: 4084-6083 Capsella grandiflora
Cagra.5118s0002 5.0kb upstream 5.0kb upstream 8192 true Scaffold5118: 6084-14275 Capsella grandiflora
Cagra.5118s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5118: 9276-14275 Capsella grandiflora
Cagra.5118s0002 5.0kb downstream 5.0kb downstream 8192 true Scaffold5118: 1084-9275 Capsella grandiflora
Cagra.5118s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5118: 1084-6083 Capsella grandiflora
Cagra.5118s0002 10.0kb upstream 10.0kb upstream 13192 true Scaffold5118: 6084-19275 Capsella grandiflora
Cagra.5118s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5118: 9276-19275 Capsella grandiflora
Cagra.5118s0002 10.0kb downstream 10.0kb downstream 9275 true Scaffold5118: 1-9275 Capsella grandiflora
Cagra.5118s0002 10.0kb downstream 10.0kb downstream 6083 false Scaffold5118: 1-6083 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374849 5261 Brassicaceae View MSA
123832111 5264 Brassicales-Malvales View MSA
124342795 5266 SBM View MSA
124237609 5268 Malvidae View MSA
124068496 5270 Rosid View MSA
123736620 5271 Pentapetalae View MSA
122792662 5272 Eudicot View MSA
122043177 5273 Angiosperm View MSA
121344146 5274 Embryophyte View MSA
123425302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain