Gene : Cagra.5118s0013 C. grandiflora v1.1
Defline:  (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  13
Name:  ? Cagra.5118s0013 Secondary Identifier:  ? PAC:28905903
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7560 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5118s0013 0.5kb upstream 0.5kb upstream 3760 true Scaffold5118: 62180-65939 Capsella grandiflora
Cagra.5118s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold5118: 65440-65939 Capsella grandiflora
Cagra.5118s0013 0.5kb downstream 0.5kb downstream 3760 true Scaffold5118: 61680-65439 Capsella grandiflora
Cagra.5118s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold5118: 61680-62179 Capsella grandiflora
Cagra.5118s0013 1.0kb upstream 1.0kb upstream 4260 true Scaffold5118: 62180-66439 Capsella grandiflora
Cagra.5118s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold5118: 65440-66439 Capsella grandiflora
Cagra.5118s0013 1.0kb downstream 1.0kb downstream 4260 true Scaffold5118: 61180-65439 Capsella grandiflora
Cagra.5118s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold5118: 61180-62179 Capsella grandiflora
Cagra.5118s0013 2.0kb upstream 2.0kb upstream 5260 true Scaffold5118: 62180-67439 Capsella grandiflora
Cagra.5118s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold5118: 65440-67439 Capsella grandiflora
Cagra.5118s0013 2.0kb downstream 2.0kb downstream 5260 true Scaffold5118: 60180-65439 Capsella grandiflora
Cagra.5118s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold5118: 60180-62179 Capsella grandiflora
Cagra.5118s0013 5.0kb upstream 5.0kb upstream 8260 true Scaffold5118: 62180-70439 Capsella grandiflora
Cagra.5118s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold5118: 65440-70439 Capsella grandiflora
Cagra.5118s0013 5.0kb downstream 5.0kb downstream 8260 true Scaffold5118: 57180-65439 Capsella grandiflora
Cagra.5118s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold5118: 57180-62179 Capsella grandiflora
Cagra.5118s0013 10.0kb upstream 10.0kb upstream 13260 true Scaffold5118: 62180-75439 Capsella grandiflora
Cagra.5118s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold5118: 65440-75439 Capsella grandiflora
Cagra.5118s0013 10.0kb downstream 10.0kb downstream 13260 true Scaffold5118: 52180-65439 Capsella grandiflora
Cagra.5118s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold5118: 52180-62179 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122375878 5261 Brassicaceae View MSA
123827755 5264 Brassicales-Malvales View MSA
124341581 5266 SBM View MSA
124238446 5268 Malvidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain