Gene : Cagra.4925s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15970:SF2 - ELL-ASSOCIATED FACTOR EAF Genomic Order:  2
Name:  ? Cagra.4925s0002 Secondary Identifier:  ? PAC:28906855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4925s0002 0.5kb upstream 0.5kb upstream 2036 true Scaffold4925: 5423-7458 Capsella grandiflora
Cagra.4925s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4925: 6959-7458 Capsella grandiflora
Cagra.4925s0002 0.5kb downstream 0.5kb downstream 2036 true Scaffold4925: 4923-6958 Capsella grandiflora
Cagra.4925s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4925: 4923-5422 Capsella grandiflora
Cagra.4925s0002 1.0kb upstream 1.0kb upstream 2536 true Scaffold4925: 5423-7958 Capsella grandiflora
Cagra.4925s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4925: 6959-7958 Capsella grandiflora
Cagra.4925s0002 1.0kb downstream 1.0kb downstream 2536 true Scaffold4925: 4423-6958 Capsella grandiflora
Cagra.4925s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4925: 4423-5422 Capsella grandiflora
Cagra.4925s0002 2.0kb upstream 2.0kb upstream 3536 true Scaffold4925: 5423-8958 Capsella grandiflora
Cagra.4925s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4925: 6959-8958 Capsella grandiflora
Cagra.4925s0002 2.0kb downstream 2.0kb downstream 3536 true Scaffold4925: 3423-6958 Capsella grandiflora
Cagra.4925s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4925: 3423-5422 Capsella grandiflora
Cagra.4925s0002 5.0kb upstream 5.0kb upstream 6536 true Scaffold4925: 5423-11958 Capsella grandiflora
Cagra.4925s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4925: 6959-11958 Capsella grandiflora
Cagra.4925s0002 5.0kb downstream 5.0kb downstream 6536 true Scaffold4925: 423-6958 Capsella grandiflora
Cagra.4925s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4925: 423-5422 Capsella grandiflora
Cagra.4925s0002 10.0kb upstream 10.0kb upstream 10062 true Scaffold4925: 5423-15484 Capsella grandiflora
Cagra.4925s0002 10.0kb upstream 10.0kb upstream 8526 false Scaffold4925: 6959-15484 Capsella grandiflora
Cagra.4925s0002 10.0kb downstream 10.0kb downstream 6958 true Scaffold4925: 1-6958 Capsella grandiflora
Cagra.4925s0002 10.0kb downstream 10.0kb downstream 5422 false Scaffold4925: 1-5422 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379409 5261 Brassicaceae View MSA
123838905 5264 Brassicales-Malvales View MSA
124347123 5266 SBM View MSA
124245321 5268 Malvidae View MSA
124060442 5270 Rosid View MSA
123736419 5271 Pentapetalae View MSA
122791922 5272 Eudicot View MSA
122044960 5273 Angiosperm View MSA
121347261 5274 Embryophyte View MSA
123428623 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain