Gene : Cagra.4936s0001 C. grandiflora v1.1
Defline:  (1 of 6) PTHR12042:SF18 - ALPHA 1,4-GLYCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  1
Name:  ? Cagra.4936s0001 Secondary Identifier:  ? PAC:28896461
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4936s0001 0.5kb upstream 0.5kb upstream 1545 true Scaffold4936: 1032-2576 Capsella grandiflora
Cagra.4936s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4936: 1032-1531 Capsella grandiflora
Cagra.4936s0001 0.5kb downstream 0.5kb downstream 1545 true Scaffold4936: 1532-3076 Capsella grandiflora
Cagra.4936s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4936: 2577-3076 Capsella grandiflora
Cagra.4936s0001 1.0kb upstream 1.0kb upstream 2045 true Scaffold4936: 532-2576 Capsella grandiflora
Cagra.4936s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4936: 532-1531 Capsella grandiflora
Cagra.4936s0001 1.0kb downstream 1.0kb downstream 2045 true Scaffold4936: 1532-3576 Capsella grandiflora
Cagra.4936s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4936: 2577-3576 Capsella grandiflora
Cagra.4936s0001 2.0kb upstream 2.0kb upstream 2576 true Scaffold4936: 1-2576 Capsella grandiflora
Cagra.4936s0001 2.0kb upstream 2.0kb upstream 1531 false Scaffold4936: 1-1531 Capsella grandiflora
Cagra.4936s0001 2.0kb downstream 2.0kb downstream 3045 true Scaffold4936: 1532-4576 Capsella grandiflora
Cagra.4936s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4936: 2577-4576 Capsella grandiflora
Cagra.4936s0001 5.0kb upstream 5.0kb upstream 2576 true Scaffold4936: 1-2576 Capsella grandiflora
Cagra.4936s0001 5.0kb upstream 5.0kb upstream 1531 false Scaffold4936: 1-1531 Capsella grandiflora
Cagra.4936s0001 5.0kb downstream 5.0kb downstream 5771 true Scaffold4936: 1532-7302 Capsella grandiflora
Cagra.4936s0001 5.0kb downstream 5.0kb downstream 4726 false Scaffold4936: 2577-7302 Capsella grandiflora
Cagra.4936s0001 10.0kb upstream 10.0kb upstream 2576 true Scaffold4936: 1-2576 Capsella grandiflora
Cagra.4936s0001 10.0kb upstream 10.0kb upstream 1531 false Scaffold4936: 1-1531 Capsella grandiflora
Cagra.4936s0001 10.0kb downstream 10.0kb downstream 5771 true Scaffold4936: 1532-7302 Capsella grandiflora
Cagra.4936s0001 10.0kb downstream 10.0kb downstream 4726 false Scaffold4936: 2577-7302 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665731 5273 Angiosperm View MSA
122333872 5261 Brassicaceae Singleton cluster - no MSA
123774770 5264 Brassicales-Malvales Singleton cluster - no MSA
124351870 5266 SBM View MSA
124181204 5268 Malvidae View MSA
124051578 5270 Rosid View MSA
123620218 5271 Pentapetalae View MSA
122654632 5272 Eudicot View MSA
120937692 5274 Embryophyte View MSA
122978173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain