Gene : Cagra.4923s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23107 - SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN Genomic Order:  7
Name:  ? Cagra.4923s0007 Secondary Identifier:  ? PAC:28911635
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4923s0007 0.5kb upstream 0.5kb upstream 2280 true Scaffold4923: 27673-29952 Capsella grandiflora
Cagra.4923s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold4923: 27673-28172 Capsella grandiflora
Cagra.4923s0007 0.5kb downstream 0.5kb downstream 2280 true Scaffold4923: 28173-30452 Capsella grandiflora
Cagra.4923s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold4923: 29953-30452 Capsella grandiflora
Cagra.4923s0007 1.0kb upstream 1.0kb upstream 2780 true Scaffold4923: 27173-29952 Capsella grandiflora
Cagra.4923s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold4923: 27173-28172 Capsella grandiflora
Cagra.4923s0007 1.0kb downstream 1.0kb downstream 2780 true Scaffold4923: 28173-30952 Capsella grandiflora
Cagra.4923s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold4923: 29953-30952 Capsella grandiflora
Cagra.4923s0007 2.0kb upstream 2.0kb upstream 3780 true Scaffold4923: 26173-29952 Capsella grandiflora
Cagra.4923s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold4923: 26173-28172 Capsella grandiflora
Cagra.4923s0007 2.0kb downstream 2.0kb downstream 3780 true Scaffold4923: 28173-31952 Capsella grandiflora
Cagra.4923s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold4923: 29953-31952 Capsella grandiflora
Cagra.4923s0007 5.0kb upstream 5.0kb upstream 6780 true Scaffold4923: 23173-29952 Capsella grandiflora
Cagra.4923s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold4923: 23173-28172 Capsella grandiflora
Cagra.4923s0007 5.0kb downstream 5.0kb downstream 6642 true Scaffold4923: 28173-34814 Capsella grandiflora
Cagra.4923s0007 5.0kb downstream 5.0kb downstream 4862 false Scaffold4923: 29953-34814 Capsella grandiflora
Cagra.4923s0007 10.0kb upstream 10.0kb upstream 11780 true Scaffold4923: 18173-29952 Capsella grandiflora
Cagra.4923s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold4923: 18173-28172 Capsella grandiflora
Cagra.4923s0007 10.0kb downstream 10.0kb downstream 6642 true Scaffold4923: 28173-34814 Capsella grandiflora
Cagra.4923s0007 10.0kb downstream 10.0kb downstream 4862 false Scaffold4923: 29953-34814 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377357 5261 Brassicaceae View MSA
123830684 5264 Brassicales-Malvales View MSA
124349935 5266 SBM View MSA
124241456 5268 Malvidae View MSA
124069002 5270 Rosid View MSA
123750864 5271 Pentapetalae View MSA
122788069 5272 Eudicot View MSA
122049266 5273 Angiosperm View MSA
121351391 5274 Embryophyte View MSA
123426567 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain