Gene : Cagra.4909s0046 C. grandiflora v1.1
Defline:  (1 of 2) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  46
Name:  ? Cagra.4909s0046 Secondary Identifier:  ? PAC:28904506
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5381 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4909s0046 0.5kb upstream 0.5kb upstream 3949 true Scaffold4909: 158928-162876 Capsella grandiflora
Cagra.4909s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold4909: 162377-162876 Capsella grandiflora
Cagra.4909s0046 0.5kb downstream 0.5kb downstream 3949 true Scaffold4909: 158428-162376 Capsella grandiflora
Cagra.4909s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold4909: 158428-158927 Capsella grandiflora
Cagra.4909s0046 1.0kb upstream 1.0kb upstream 4449 true Scaffold4909: 158928-163376 Capsella grandiflora
Cagra.4909s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold4909: 162377-163376 Capsella grandiflora
Cagra.4909s0046 1.0kb downstream 1.0kb downstream 4449 true Scaffold4909: 157928-162376 Capsella grandiflora
Cagra.4909s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold4909: 157928-158927 Capsella grandiflora
Cagra.4909s0046 2.0kb upstream 2.0kb upstream 5449 true Scaffold4909: 158928-164376 Capsella grandiflora
Cagra.4909s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold4909: 162377-164376 Capsella grandiflora
Cagra.4909s0046 2.0kb downstream 2.0kb downstream 5449 true Scaffold4909: 156928-162376 Capsella grandiflora
Cagra.4909s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold4909: 156928-158927 Capsella grandiflora
Cagra.4909s0046 5.0kb upstream 5.0kb upstream 8449 true Scaffold4909: 158928-167376 Capsella grandiflora
Cagra.4909s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold4909: 162377-167376 Capsella grandiflora
Cagra.4909s0046 5.0kb downstream 5.0kb downstream 8449 true Scaffold4909: 153928-162376 Capsella grandiflora
Cagra.4909s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold4909: 153928-158927 Capsella grandiflora
Cagra.4909s0046 10.0kb upstream 10.0kb upstream 13449 true Scaffold4909: 158928-172376 Capsella grandiflora
Cagra.4909s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold4909: 162377-172376 Capsella grandiflora
Cagra.4909s0046 10.0kb downstream 10.0kb downstream 13449 true Scaffold4909: 148928-162376 Capsella grandiflora
Cagra.4909s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold4909: 148928-158927 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365718 5261 Brassicaceae View MSA
123799019 5264 Brassicales-Malvales View MSA
124348099 5266 SBM View MSA
124237112 5268 Malvidae View MSA
124065117 5270 Rosid View MSA
123744926 5271 Pentapetalae View MSA
122787936 5272 Eudicot View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain